RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PROK1P58294 105 aa6.02□□□□□ -1.45
SRGAP1-202ENST00000537556 ROS1P08922 2347 aa6.02□□□□□ -1.45
SRGAP1-202ENST00000537556 TRBV10-1A0A0K0K1A3 114 aa6.02□□□□□ -1.45
SRGAP1-202ENST00000537556 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
SRGAP1-202ENST00000537556 COX7B2Q8TF08 81 aa6.02□□□□□ -1.45
SRGAP1-202ENST00000537556 ATP1A1-AS1Q5TC04 95 aa6.01□□□□□ -1.45
SRGAP1-202ENST00000537556 LINC01560Q8TB33 94 aa6.01□□□□□ -1.45
SRGAP1-202ENST00000537556 hDV103S1A0JD37 113 aa6.01□□□□□ -1.45
SRGAP1-202ENST00000537556 K7EQG2 157 aa6.01□□□□□ -1.45
SRGAP1-202ENST00000537556 GNLYP22749 145 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 NTM-AS1Q6ZSK4 140 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 Q8NA96 180 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 ZNF292O60281 2723 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 Q6ZRP5 223 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 FAM215AQ9Y5M1 114 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 DMDP11532 3685 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 LYNX1G3V0Z9 82 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 IGKV3-20P01619 116 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 LYNX1P0DP58 116 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 PLA2G2CQ5R387 149 aa6□□□□□ -1.45
SRGAP1-202ENST00000537556 BBC3Q96PG8 261 aaPredicted RBP6□□□□□ -1.45
SRGAP1-202ENST00000537556 RP1L1Q8IWN7 2480 aaPredicted RBP5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 OTOGLQ3ZCN5 2332 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 K7EQD1 137 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 IGHV3-53P01767 116 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 UBE2BP63146 152 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 TOMM7Q9P0U1 55 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 PATE3B3GLJ2 98 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 SPINK13Q1W4C9 94 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 FDCSPQ8NFU4 85 aa5.99□□□□□ -1.45
SRGAP1-202ENST00000537556 SPENQ96T58 3664 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-202ENST00000537556 C11orf44Q8N8P7 122 aa5.98□□□□□ -1.45
SRGAP1-202ENST00000537556 Q9UF83 564 aa5.98□□□□□ -1.45
SRGAP1-202ENST00000537556 PKDREJQ9NTG1 2253 aa5.98□□□□□ -1.45
SRGAP1-202ENST00000537556 ZFHX3Q15911 3703 aa5.98□□□□□ -1.45
SRGAP1-202ENST00000537556 H3BQ85 93 aa5.98□□□□□ -1.45
SRGAP1-202ENST00000537556 TACC2O95359 2948 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 PSPHP1O15172 72 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 CDC42SE2Q9NRR3 84 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 CACNA1AO00555 2505 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 C9orf66Q5T8R8 295 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 Q6ZSN1 163 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 SMG1Q96Q15 3661 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 DMXL2Q8TDJ6 3036 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 TRAV22A0A0B4J277 110 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 USMG5Q96IX5 58 aa5.97□□□□□ -1.45
SRGAP1-202ENST00000537556 GVINP1Q7Z2Y8 2422 aa5.96□□□□□ -1.45
SRGAP1-202ENST00000537556 A0A1W2PNU3 283 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-202ENST00000537556 NDUFS5O43920 106 aa5.96□□□□□ -1.46
SRGAP1-202ENST00000537556 HTN1P15515 57 aa5.96□□□□□ -1.46
SRGAP1-202ENST00000537556 ZNF843Q8N446 348 aa5.96□□□□□ -1.46
SRGAP1-202ENST00000537556 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
SRGAP1-202ENST00000537556 ZFHX2Q9C0A1 2572 aaPredicted RBP5.96□□□□□ -1.46
SRGAP1-202ENST00000537556 ZFHX4Q86UP3 3567 aa5.95□□□□□ -1.46
SRGAP1-202ENST00000537556 LRCOL1A6NCL2 159 aa5.95□□□□□ -1.46
SRGAP1-202ENST00000537556 K7EMT4 169 aa5.95□□□□□ -1.46
SRGAP1-202ENST00000537556 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
SRGAP1-202ENST00000537556 LINC00588Q9Y4M8 146 aa5.95□□□□□ -1.46
SRGAP1-202ENST00000537556 MED13LQ71F56 2210 aa5.95□□□□□ -1.46
SRGAP1-202ENST00000537556 HIGD2AQ9BW72 106 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 A0A096LNT2 108 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 M0R378 163 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 C5orf56Q8N8D9 126 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 M0R2N4 97 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 SYCNQ0VAF6 134 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 SCXQ7RTU7 201 aa5.94□□□□□ -1.46
SRGAP1-202ENST00000537556 CSMD1Q96PZ7 3565 aa5.93□□□□□ -1.46
SRGAP1-202ENST00000537556 UBE2L6O14933 153 aa5.93□□□□□ -1.46
SRGAP1-202ENST00000537556 CD164L2Q6UWJ8 174 aa5.93□□□□□ -1.46
SRGAP1-202ENST00000537556 H3BUA1 57 aa5.93□□□□□ -1.46
SRGAP1-202ENST00000537556 IGHV3-11P01762 117 aa5.93□□□□□ -1.46
SRGAP1-202ENST00000537556 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
SRGAP1-202ENST00000537556 IGHV4-38-2P0DP08 117 aa5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 UBE2AP49459 152 aa5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 APOC4P55056 127 aa5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 MUC7Q8TAX7 377 aa5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 ARRDC1-AS1Q9H2J1 176 aa5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 RIF1Q5UIP0 2472 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-202ENST00000537556 C6orf99Q4VX62 202 aa5.91□□□□□ -1.46
SRGAP1-202ENST00000537556 UBE2E2Q96LR5 201 aa5.91□□□□□ -1.46
SRGAP1-202ENST00000537556 CACNA1BQ00975 2339 aa5.91□□□□□ -1.46
SRGAP1-202ENST00000537556 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
SRGAP1-202ENST00000537556 DMXL1Q9Y485 3027 aa5.91□□□□□ -1.46
SRGAP1-202ENST00000537556 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.46
SRGAP1-202ENST00000537556 PCNX1Q96RV3 2341 aa5.9□□□□□ -1.46
SRGAP1-202ENST00000537556 A8MUN3 132 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 ADORA2A-AS1P86434 159 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 LINC00269Q8N2A0 174 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 LINC01356Q8N9X3 169 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 C11orf45Q8TAV5 145 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 SPTBN2O15020 2390 aa5.9□□□□□ -1.47
SRGAP1-202ENST00000537556 TRBV6-8A0A0A6YYG3 113 aa5.89□□□□□ -1.47
SRGAP1-202ENST00000537556 LPAL2Q16609 132 aa5.89□□□□□ -1.47
SRGAP1-202ENST00000537556 SPTBN4Q9H254 2564 aa5.89□□□□□ -1.47
SRGAP1-202ENST00000537556 PSCAO43653 123 aa5.89□□□□□ -1.47
SRGAP1-202ENST00000537556 LY6HO94772 140 aa5.89□□□□□ -1.47
SRGAP1-202ENST00000537556 EP300Q09472 2414 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms