RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 LINC00959A0A1B0GUT2 108 aa16.33■□□□□ 0.2
PTPMT1-205ENST00000534775 SS18Q15532 418 aa16.33■□□□□ 0.2
PTPMT1-205ENST00000534775 C15orf53Q8NAA6 179 aa16.32■□□□□ 0.2
PTPMT1-205ENST00000534775 ANGP03950 147 aaKnown RBP16.31■□□□□ 0.2
PTPMT1-205ENST00000534775 COL5A1-AS1Q5SY13 56 aa16.31■□□□□ 0.2
PTPMT1-205ENST00000534775 TAL2Q16559 108 aa16.3■□□□□ 0.2
PTPMT1-205ENST00000534775 IGLV5-39A0A0G2JS06 123 aa16.29■□□□□ 0.2
PTPMT1-205ENST00000534775 SMIM1B2RUZ4 78 aa16.29■□□□□ 0.2
PTPMT1-205ENST00000534775 NHLRC4P0CG21 123 aaPredicted RBP16.29■□□□□ 0.2
PTPMT1-205ENST00000534775 LINC00269Q8N2A0 174 aa16.29■□□□□ 0.2
PTPMT1-205ENST00000534775 ZFAND6Q6FIF0 208 aa16.27■□□□□ 0.2
PTPMT1-205ENST00000534775 IGHV3OR16-9A0A0B4J2B5 98 aa16.27■□□□□ 0.19
PTPMT1-205ENST00000534775 REG3AQ06141 175 aa16.27■□□□□ 0.19
PTPMT1-205ENST00000534775 ESRGQ1W209 222 aa16.27■□□□□ 0.19
PTPMT1-205ENST00000534775 ORAOV1Q8WV07 137 aa16.27■□□□□ 0.19
PTPMT1-205ENST00000534775 HIST1H4GQ99525 98 aa16.27■□□□□ 0.19
PTPMT1-205ENST00000534775 NDUFA12Q9UI09 145 aa16.27■□□□□ 0.19
PTPMT1-205ENST00000534775 CLPSL2Q6UWE3 100 aa16.26■□□□□ 0.19
PTPMT1-205ENST00000534775 Q8N3U1 123 aa16.25■□□□□ 0.19
PTPMT1-205ENST00000534775 A0A087WZ39 114 aa16.23■□□□□ 0.19
PTPMT1-205ENST00000534775 GCSHP23434 173 aa16.23■□□□□ 0.19
PTPMT1-205ENST00000534775 CEND1Q8N111 149 aa16.23■□□□□ 0.19
PTPMT1-205ENST00000534775 SPANXB1Q9NS25 103 aaPredicted RBP16.23■□□□□ 0.19
PTPMT1-205ENST00000534775 XCL1P47992 114 aa16.22■□□□□ 0.19
PTPMT1-205ENST00000534775 WFDC10BQ8IUB3 73 aa16.22■□□□□ 0.19
PTPMT1-205ENST00000534775 TM2D2Q9BX73 214 aa16.22■□□□□ 0.19
PTPMT1-205ENST00000534775 HUWE1Q7Z6Z7 4374 aaKnown RBP16.21■□□□□ 0.19
PTPMT1-205ENST00000534775 A6NDN8 102 aa16.21■□□□□ 0.19
PTPMT1-205ENST00000534775 NDUFA1O15239 70 aa16.21■□□□□ 0.19
PTPMT1-205ENST00000534775 SRSF9Q13242 221 aaKnown RBP eCLIP16.21■□□□□ 0.19
PTPMT1-205ENST00000534775 C10orf126Q8N4M7 172 aa16.21■□□□□ 0.19
PTPMT1-205ENST00000534775 A0A0J9YXY3 114 aa16.2■□□□□ 0.18
PTPMT1-205ENST00000534775 LINC01561Q8N1V8 128 aa16.2■□□□□ 0.18
PTPMT1-205ENST00000534775 PRR34Q9NV39 138 aa16.2■□□□□ 0.18
PTPMT1-205ENST00000534775 KLK12Q9UKR0 248 aa16.2■□□□□ 0.18
PTPMT1-205ENST00000534775 IGHV3-30P01768 117 aa16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 IGHV3-33P01772 117 aa16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 IGHV3-30-5P0DP03 117 aa16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 CD164L2Q6UWJ8 174 aa16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 TMEM238C9JI98 176 aa16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 C5orf38Q86SI9 138 aa16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 CHCHD10Q8WYQ3 142 aaPredicted RBP16.19■□□□□ 0.18
PTPMT1-205ENST00000534775 IGLL5B9A064 214 aa16.18■□□□□ 0.18
PTPMT1-205ENST00000534775 PTTG1IPP53801 180 aa16.18■□□□□ 0.18
PTPMT1-205ENST00000534775 DNAH9Q9NYC9 4486 aa16.17■□□□□ 0.18
PTPMT1-205ENST00000534775 CRPP02741 224 aa16.17■□□□□ 0.18
PTPMT1-205ENST00000534775 COX7B2Q8TF08 81 aa16.17■□□□□ 0.18
PTPMT1-205ENST00000534775 FXYD2P54710 66 aa16.16■□□□□ 0.18
PTPMT1-205ENST00000534775 LINC01556Q5JQF7 62 aa16.16■□□□□ 0.18
PTPMT1-205ENST00000534775 Q9H8V8 135 aa16.16■□□□□ 0.18
PTPMT1-205ENST00000534775 COX7A2LO14548 114 aa16.15■□□□□ 0.18
PTPMT1-205ENST00000534775 IGLV10-54A0A075B6I4 117 aa16.14■□□□□ 0.17
PTPMT1-205ENST00000534775 TRAV8-4A0A0B4J246 113 aa16.14■□□□□ 0.17
PTPMT1-205ENST00000534775 TIMM17BO60830 172 aa16.14■□□□□ 0.17
PTPMT1-205ENST00000534775 CCL18P55774 89 aa16.14■□□□□ 0.17
PTPMT1-205ENST00000534775 HERV-K104P63124 156 aa16.14■□□□□ 0.17
PTPMT1-205ENST00000534775 ENHOQ6UWT2 76 aa16.14■□□□□ 0.17
PTPMT1-205ENST00000534775 MEGF8Q7Z7M0 2845 aa16.13■□□□□ 0.17
PTPMT1-205ENST00000534775 A0A1B0GV90 55 aa16.13■□□□□ 0.17
PTPMT1-205ENST00000534775 ZNF625Q96I27 306 aaPredicted RBP16.13■□□□□ 0.17
PTPMT1-205ENST00000534775 COL7A1Q02388 2944 aa16.13■□□□□ 0.17
PTPMT1-205ENST00000534775 TMEM238LA0A1B0GVL6 79 aa16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 A6NJY4 79 aa16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 UBE2WQ96B02 151 aa16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 TOMM7Q9P0U1 55 aa16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 CIRBPQ14011 172 aaKnown RBP16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 MIAQ16674 131 aa16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 SFTA2Q6UW10 78 aa16.12■□□□□ 0.17
PTPMT1-205ENST00000534775 DNAH10OSP0CZ25 163 aa16.1■□□□□ 0.17
PTPMT1-205ENST00000534775 FOXI1Q12951 378 aa16.1■□□□□ 0.17
PTPMT1-205ENST00000534775 Q6ZVH6 145 aa16.1■□□□□ 0.17
PTPMT1-205ENST00000534775 LINC00588Q9Y4M8 146 aa16.1■□□□□ 0.17
PTPMT1-205ENST00000534775 SMIM13P0DJ93 91 aa16.09■□□□□ 0.17
PTPMT1-205ENST00000534775 MALP21145 153 aa16.09■□□□□ 0.17
PTPMT1-205ENST00000534775 LITAFQ99732 161 aa16.09■□□□□ 0.17
PTPMT1-205ENST00000534775 SPANXDQ9BXN6 97 aa16.09■□□□□ 0.17
PTPMT1-205ENST00000534775 SPANXCQ9NY87 97 aa16.09■□□□□ 0.17
PTPMT1-205ENST00000534775 GAGE12HA6NDE8 117 aa16.08■□□□□ 0.17
PTPMT1-205ENST00000534775 K7EP13 123 aa16.08■□□□□ 0.17
PTPMT1-205ENST00000534775 TAX1BP3O14907 124 aa16.08■□□□□ 0.17
PTPMT1-205ENST00000534775 PRSS2P07478 247 aa16.08■□□□□ 0.17
PTPMT1-205ENST00000534775 Q8IZM0 81 aa16.08■□□□□ 0.17
PTPMT1-205ENST00000534775 NHP2Q9NX24 153 aaKnown RBP16.08■□□□□ 0.17
PTPMT1-205ENST00000534775 APOMO95445 188 aa16.06■□□□□ 0.16
PTPMT1-205ENST00000534775 C6orf226Q5I0X4 101 aa16.06■□□□□ 0.16
PTPMT1-205ENST00000534775 MEIG1Q5JSS6 88 aa16.05■□□□□ 0.16
PTPMT1-205ENST00000534775 UPK3BQ9BT76 320 aa16.05■□□□□ 0.16
PTPMT1-205ENST00000534775 COX11Q9Y6N1 276 aa16.05■□□□□ 0.16
PTPMT1-205ENST00000534775 RPL24P83731 157 aaKnown RBP16.05■□□□□ 0.16
PTPMT1-205ENST00000534775 PRKDCP78527 4128 aaKnown RBP16.05■□□□□ 0.16
PTPMT1-205ENST00000534775 ADAMTSL4-AS1Q5T5F5 129 aa16.04■□□□□ 0.16
PTPMT1-205ENST00000534775 A0A1B0GWB2 263 aa16.03■□□□□ 0.16
PTPMT1-205ENST00000534775 MUSTN1Q8IVN3 82 aa16.03■□□□□ 0.16
PTPMT1-205ENST00000534775 NUPR2A6NF83 97 aa16.02■□□□□ 0.16
PTPMT1-205ENST00000534775 IFITM1P13164 125 aa16.02■□□□□ 0.16
PTPMT1-205ENST00000534775 CFAP161Q6P656 301 aa16.02■□□□□ 0.16
PTPMT1-205ENST00000534775 CXCL5P42830 114 aa16.01■□□□□ 0.15
PTPMT1-205ENST00000534775 COPS9Q8WXC6 57 aa16.01■□□□□ 0.15
PTPMT1-205ENST00000534775 KLK5Q9Y337 293 aaPredicted RBP16.01■□□□□ 0.15
PTPMT1-205ENST00000534775 K7ERJ3 54 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms