RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 LOC100131303A0A0U1RQF7 123 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 H7C423 109 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 NDUFA1O15239 70 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 LINC01600Q96MT4 127 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 INAFM1C9JVW0 142 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 UBE2L6O14933 153 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 FHL2Q14192 279 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 MIAQ16674 131 aa13.64□□□□□ -0.23
UBXN1-215ENST00000533476 ADAMTSL4-AS1Q5T5F5 129 aa13.63□□□□□ -0.23
UBXN1-215ENST00000533476 CARD19Q96LW7 228 aa13.62□□□□□ -0.23
UBXN1-215ENST00000533476 IFITM1P13164 125 aa13.62□□□□□ -0.23
UBXN1-215ENST00000533476 KIR2DL5BQ8NHK3 375 aa13.62□□□□□ -0.23
UBXN1-215ENST00000533476 TRAV13-1A0A0B4J241 112 aa13.61□□□□□ -0.23
UBXN1-215ENST00000533476 CRLF1O75462 422 aa13.61□□□□□ -0.23
UBXN1-215ENST00000533476 LINC00612Q8N6U2 182 aa13.61□□□□□ -0.23
UBXN1-215ENST00000533476 NOTCH3Q9UM47 2321 aa13.61□□□□□ -0.23
UBXN1-215ENST00000533476 ATXN8Q156A1 80 aa13.6□□□□□ -0.23
UBXN1-215ENST00000533476 C9orf66Q5T8R8 295 aa13.6□□□□□ -0.23
UBXN1-215ENST00000533476 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
UBXN1-215ENST00000533476 SLC25A20O43772 301 aa13.6□□□□□ -0.23
UBXN1-215ENST00000533476 PRSS2P07478 247 aa13.6□□□□□ -0.23
UBXN1-215ENST00000533476 CDIP1Q9H305 208 aa13.59□□□□□ -0.23
UBXN1-215ENST00000533476 F5H768 121 aa13.58□□□□□ -0.24
UBXN1-215ENST00000533476 Q1RN00 199 aa13.58□□□□□ -0.24
UBXN1-215ENST00000533476 ANKRD29Q8N6D5 301 aa13.58□□□□□ -0.24
UBXN1-215ENST00000533476 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
UBXN1-215ENST00000533476 C9JAW5 83 aa13.57□□□□□ -0.24
UBXN1-215ENST00000533476 X6R8D5 127 aa13.57□□□□□ -0.24
UBXN1-215ENST00000533476 TRBV6-8A0A0A6YYG3 113 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 SPATA3Q8NHX4 192 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 H7C2G1 150 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 DEFB130BP0DP73 79 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 DEFB130AP0DP74 79 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 LINC01620Q4KN68 170 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 Q9H8V8 135 aa13.56□□□□□ -0.24
UBXN1-215ENST00000533476 CIRBPQ14011 172 aaKnown RBP13.55□□□□□ -0.24
UBXN1-215ENST00000533476 TMEM262E9PQX1 116 aa13.54□□□□□ -0.24
UBXN1-215ENST00000533476 TRIAP1O43715 76 aa13.54□□□□□ -0.24
UBXN1-215ENST00000533476 GAGE6Q13070 117 aa13.54□□□□□ -0.24
UBXN1-215ENST00000533476 ICOSQ9Y6W8 199 aa13.54□□□□□ -0.24
UBXN1-215ENST00000533476 COX6CP09669 75 aa13.53□□□□□ -0.24
UBXN1-215ENST00000533476 TRBV10-2A0A0K0K1G8 114 aa13.52□□□□□ -0.24
UBXN1-215ENST00000533476 ZNF625Q96I27 306 aaPredicted RBP13.52□□□□□ -0.24
UBXN1-215ENST00000533476 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.24
UBXN1-215ENST00000533476 NPC2P61916 151 aa13.52□□□□□ -0.25
UBXN1-215ENST00000533476 COPS9Q8WXC6 57 aa13.51□□□□□ -0.25
UBXN1-215ENST00000533476 CHCHD5Q9BSY4 110 aa13.51□□□□□ -0.25
UBXN1-215ENST00000533476 DAND5Q8N907 189 aa13.51□□□□□ -0.25
UBXN1-215ENST00000533476 CITED1Q99966 193 aa13.51□□□□□ -0.25
UBXN1-215ENST00000533476 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
UBXN1-215ENST00000533476 HERV-K104P63124 156 aa13.5□□□□□ -0.25
UBXN1-215ENST00000533476 PPDPFQ9H3Y8 114 aa13.5□□□□□ -0.25
UBXN1-215ENST00000533476 GYPEP15421 78 aa13.49□□□□□ -0.25
UBXN1-215ENST00000533476 RPL13AP40429 203 aaKnown RBP13.49□□□□□ -0.25
UBXN1-215ENST00000533476 PRIMA1Q86XR5 153 aa13.49□□□□□ -0.25
UBXN1-215ENST00000533476 LYRM9A8MSI8 78 aa13.49□□□□□ -0.25
UBXN1-215ENST00000533476 LINC00308Q8TCZ7 52 aa13.49□□□□□ -0.25
UBXN1-215ENST00000533476 APOC4P55056 127 aa13.47□□□□□ -0.25
UBXN1-215ENST00000533476 PRO0255Q9UI72 69 aa13.47□□□□□ -0.25
UBXN1-215ENST00000533476 H3BT86 120 aa13.47□□□□□ -0.25
UBXN1-215ENST00000533476 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
UBXN1-215ENST00000533476 A0A1B0GV72 72 aa13.46□□□□□ -0.25
UBXN1-215ENST00000533476 XGP55808 180 aa13.46□□□□□ -0.25
UBXN1-215ENST00000533476 LST1O00453 97 aa13.45□□□□□ -0.26
UBXN1-215ENST00000533476 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
UBXN1-215ENST00000533476 MEIG1Q5JSS6 88 aa13.45□□□□□ -0.26
UBXN1-215ENST00000533476 COX7B2Q8TF08 81 aa13.45□□□□□ -0.26
UBXN1-215ENST00000533476 NTN5Q8WTR8 489 aaPredicted RBP13.45□□□□□ -0.26
UBXN1-215ENST00000533476 MT-ATP8P03928 68 aa13.44□□□□□ -0.26
UBXN1-215ENST00000533476 VWFP04275 2813 aa13.44□□□□□ -0.26
UBXN1-215ENST00000533476 IGHV3OR16-9A0A0B4J2B5 98 aa13.43□□□□□ -0.26
UBXN1-215ENST00000533476 IGKV3OR2-268A0A0C4DH90 116 aa13.43□□□□□ -0.26
UBXN1-215ENST00000533476 SOSTDC1Q6X4U4 206 aa13.43□□□□□ -0.26
UBXN1-215ENST00000533476 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
UBXN1-215ENST00000533476 C2orf82Q6UX34 121 aa13.42□□□□□ -0.26
UBXN1-215ENST00000533476 A0A087WZ39 114 aa13.41□□□□□ -0.26
UBXN1-215ENST00000533476 A0A1B0GUV1 79 aa13.41□□□□□ -0.26
UBXN1-215ENST00000533476 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
UBXN1-215ENST00000533476 PAX4O43316 350 aa13.41□□□□□ -0.26
UBXN1-215ENST00000533476 WFDC9Q8NEX5 89 aa13.41□□□□□ -0.26
UBXN1-215ENST00000533476 UBE2WQ96B02 151 aa13.41□□□□□ -0.26
UBXN1-215ENST00000533476 LINC00959A0A1B0GUT2 108 aa13.4□□□□□ -0.26
UBXN1-215ENST00000533476 WIPF1O43516 503 aa13.4□□□□□ -0.26
UBXN1-215ENST00000533476 ATRQ13535 2644 aa13.39□□□□□ -0.27
UBXN1-215ENST00000533476 TENM1Q9UKZ4 2725 aa13.39□□□□□ -0.27
UBXN1-215ENST00000533476 CKS1BP61024 79 aa13.39□□□□□ -0.27
UBXN1-215ENST00000533476 MIFP14174 115 aa13.38□□□□□ -0.27
UBXN1-215ENST00000533476 DEFB121Q5J5C9 76 aa13.38□□□□□ -0.27
UBXN1-215ENST00000533476 CLEC2BQ92478 149 aa13.38□□□□□ -0.27
UBXN1-215ENST00000533476 DEFB4AO15263 64 aa13.37□□□□□ -0.27
UBXN1-215ENST00000533476 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
UBXN1-215ENST00000533476 Q8NAQ8 132 aa13.37□□□□□ -0.27
UBXN1-215ENST00000533476 TOMM7Q9P0U1 55 aa13.37□□□□□ -0.27
UBXN1-215ENST00000533476 DAD1P61803 113 aa13.37□□□□□ -0.27
UBXN1-215ENST00000533476 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
UBXN1-215ENST00000533476 COX7A2LO14548 114 aa13.36□□□□□ -0.27
UBXN1-215ENST00000533476 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
UBXN1-215ENST00000533476 FBN1P35555 2871 aaKnown RBP13.35□□□□□ -0.27
UBXN1-215ENST00000533476 A0A096LPF7 62 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms