RNA–Protein interactions for RNA: ENST00000532542.1

TRIM3-211, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 4,419 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-211ENST00000532542 IGLV10-54A0A075B6I4 117 aa7.92□□□□□ -1.14
TRIM3-211ENST00000532542 ZNF561-AS1K7EIQ3 104 aa7.92□□□□□ -1.14
TRIM3-211ENST00000532542 NDUFA1O15239 70 aa7.92□□□□□ -1.14
TRIM3-211ENST00000532542 C9JAW5 83 aa7.92□□□□□ -1.14
TRIM3-211ENST00000532542 RBX1P62877 108 aa7.92□□□□□ -1.14
TRIM3-211ENST00000532542 S100A7L2Q5SY68 101 aa7.91□□□□□ -1.14
TRIM3-211ENST00000532542 LINC00242Q5T6M2 205 aa7.91□□□□□ -1.14
TRIM3-211ENST00000532542 RNF183Q96D59 192 aa7.91□□□□□ -1.14
TRIM3-211ENST00000532542 LINC00694P0DN24 101 aa7.91□□□□□ -1.14
TRIM3-211ENST00000532542 DAND5Q8N907 189 aa7.91□□□□□ -1.14
TRIM3-211ENST00000532542 UFSP1Q6NVU6 142 aa7.9□□□□□ -1.14
TRIM3-211ENST00000532542 C11orf45Q8TAV5 145 aa7.9□□□□□ -1.14
TRIM3-211ENST00000532542 LINC00269Q8N2A0 174 aa7.9□□□□□ -1.14
TRIM3-211ENST00000532542 A0A0B4J2C4 111 aa7.9□□□□□ -1.15
TRIM3-211ENST00000532542 IGHV3-30P01768 117 aa7.9□□□□□ -1.15
TRIM3-211ENST00000532542 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.15
TRIM3-211ENST00000532542 CXCL5P42830 114 aa7.9□□□□□ -1.15
TRIM3-211ENST00000532542 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.15
TRIM3-211ENST00000532542 KLK12Q9UKR0 248 aa7.9□□□□□ -1.15
TRIM3-211ENST00000532542 TIMM17BO60830 172 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 IGHV3-33P01772 117 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 KRTAP10-3P60369 221 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 REG3AQ06141 175 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 C2orf82Q6UX34 121 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 Q9UF83 564 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 WFDC9Q8NEX5 89 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 UBE2DNLQ8IWF7 75 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
TRIM3-211ENST00000532542 APCP25054 2843 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 A8MZ25 164 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 SPATA25Q9BR10 227 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 TSPAN13O95857 204 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 CSNK1G2-AS1Q8NCQ2 148 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 C1orf43Q9BWL3 253 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 ATRQ13535 2644 aa7.88□□□□□ -1.15
TRIM3-211ENST00000532542 DCHS2Q6V1P9 2916 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 LELP1Q5T871 98 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 X6R8D5 127 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 SPANXDQ9BXN6 97 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 SPANXCQ9NY87 97 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 CHCHD10Q8WYQ3 142 aaPredicted RBP7.87□□□□□ -1.15
TRIM3-211ENST00000532542 RMI2Q96E14 147 aa7.87□□□□□ -1.15
TRIM3-211ENST00000532542 DEFB131BA0A096LNP1 70 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 GIG44P09565 113 aaPredicted RBP7.86□□□□□ -1.15
TRIM3-211ENST00000532542 CCL18P55774 89 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 IL17DQ8TAD2 202 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 ZANQ9Y493 2812 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 ITPR2Q14571 2701 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 SLC25A20O43772 301 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 KRTAP24-1Q3LI83 254 aa7.86□□□□□ -1.15
TRIM3-211ENST00000532542 IGKV2D-24A0A075B6R9 120 aa7.85□□□□□ -1.15
TRIM3-211ENST00000532542 SMIM1B2RUZ4 78 aa7.85□□□□□ -1.15
TRIM3-211ENST00000532542 SPAG11BQ08648 103 aa7.85□□□□□ -1.15
TRIM3-211ENST00000532542 IBA57-AS1B1ANH7 110 aa7.85□□□□□ -1.15
TRIM3-211ENST00000532542 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
TRIM3-211ENST00000532542 IGLV4-60A0A075B6I1 120 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 GHRHP01286 108 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 PPDPFLQ8WWR9 84 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 COX6A2Q02221 97 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
TRIM3-211ENST00000532542 A0A1B0GUV1 79 aa7.84□□□□□ -1.15
TRIM3-211ENST00000532542 CRYBG3Q68DQ2 2970 aa7.83□□□□□ -1.16
TRIM3-211ENST00000532542 WFDC2Q14508 124 aa7.82□□□□□ -1.16
TRIM3-211ENST00000532542 CAMK2N2Q96S95 79 aa7.82□□□□□ -1.16
TRIM3-211ENST00000532542 Q9HAA7 133 aa7.82□□□□□ -1.16
TRIM3-211ENST00000532542 RETNQ9HD89 108 aa7.82□□□□□ -1.16
TRIM3-211ENST00000532542 A0A087WZ39 114 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 PSCAO43653 123 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 LINC01620Q4KN68 170 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 PLAC8L1A1L4L8 177 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 TRAV10A0A0B4J240 114 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 CARD19Q96LW7 228 aa7.81□□□□□ -1.16
TRIM3-211ENST00000532542 IGLV5-45A0A087WSX0 123 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 A0A0J9YWU9 116 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 TCL1BO95988 128 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 CELSR2Q9HCU4 2923 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 H0YGX0 51 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 ANKRD29Q8N6D5 301 aa7.8□□□□□ -1.16
TRIM3-211ENST00000532542 CELA1Q9UNI1 258 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 TRBV30A0A0K0K1B3 111 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 Q8IZM0 81 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 SETXQ7Z333 2677 aaKnown RBP7.79□□□□□ -1.16
TRIM3-211ENST00000532542 GCN1Q92616 2671 aaKnown RBP7.79□□□□□ -1.16
TRIM3-211ENST00000532542 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 C15orf53Q8NAA6 179 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 Q8NAQ8 132 aa7.79□□□□□ -1.16
TRIM3-211ENST00000532542 SBSPONQ8IVN8 264 aa7.78□□□□□ -1.16
TRIM3-211ENST00000532542 Q6ZTC4 211 aa7.78□□□□□ -1.16
TRIM3-211ENST00000532542 NANOS2P60321 138 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms