RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 PDZD2O15018 2839 aa11.89□□□□□ -0.51
VPS26B-206ENST00000531741 FHL2Q14192 279 aa11.89□□□□□ -0.51
VPS26B-206ENST00000531741 PRIMA1Q86XR5 153 aa11.89□□□□□ -0.51
VPS26B-206ENST00000531741 LOC100131303A0A0U1RQF7 123 aa11.88□□□□□ -0.51
VPS26B-206ENST00000531741 CCDC168Q8NDH2 2452 aa11.88□□□□□ -0.51
VPS26B-206ENST00000531741 NF1P21359 2839 aa11.88□□□□□ -0.51
VPS26B-206ENST00000531741 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
VPS26B-206ENST00000531741 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
VPS26B-206ENST00000531741 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
VPS26B-206ENST00000531741 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
VPS26B-206ENST00000531741 XGP55808 180 aa11.87□□□□□ -0.51
VPS26B-206ENST00000531741 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
VPS26B-206ENST00000531741 LINC00612Q8N6U2 182 aa11.87□□□□□ -0.51
VPS26B-206ENST00000531741 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
VPS26B-206ENST00000531741 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
VPS26B-206ENST00000531741 J3QKU1 62 aa11.85□□□□□ -0.51
VPS26B-206ENST00000531741 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
VPS26B-206ENST00000531741 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
VPS26B-206ENST00000531741 SHISA2Q6UWI4 295 aa11.85□□□□□ -0.51
VPS26B-206ENST00000531741 CLEC2BQ92478 149 aa11.85□□□□□ -0.51
VPS26B-206ENST00000531741 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
VPS26B-206ENST00000531741 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
VPS26B-206ENST00000531741 GAGE6Q13070 117 aa11.83□□□□□ -0.52
VPS26B-206ENST00000531741 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
VPS26B-206ENST00000531741 COX7B2Q8TF08 81 aa11.83□□□□□ -0.52
VPS26B-206ENST00000531741 CUBNO60494 3623 aa11.83□□□□□ -0.52
VPS26B-206ENST00000531741 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
VPS26B-206ENST00000531741 TEX49A0A1B0GTD5 131 aa11.82□□□□□ -0.52
VPS26B-206ENST00000531741 COX7A2LO14548 114 aa11.82□□□□□ -0.52
VPS26B-206ENST00000531741 IGHV3OR16-9A0A0B4J2B5 98 aa11.82□□□□□ -0.52
VPS26B-206ENST00000531741 ANK3Q12955 4377 aaKnown RBP11.82□□□□□ -0.52
VPS26B-206ENST00000531741 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
VPS26B-206ENST00000531741 IGLV4-60A0A075B6I1 120 aa11.81□□□□□ -0.52
VPS26B-206ENST00000531741 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
VPS26B-206ENST00000531741 A0A1B0GV72 72 aa11.81□□□□□ -0.52
VPS26B-206ENST00000531741 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
VPS26B-206ENST00000531741 PF4P02776 101 aa11.8□□□□□ -0.52
VPS26B-206ENST00000531741 DEFB121Q5J5C9 76 aa11.8□□□□□ -0.52
VPS26B-206ENST00000531741 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
VPS26B-206ENST00000531741 SMIM9A6NGZ8 99 aa11.8□□□□□ -0.52
VPS26B-206ENST00000531741 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
VPS26B-206ENST00000531741 ACANP16112 2415 aa11.79□□□□□ -0.52
VPS26B-206ENST00000531741 A0A087WZ39 114 aa11.79□□□□□ -0.52
VPS26B-206ENST00000531741 FAM222AQ5U5X8 452 aa11.79□□□□□ -0.52
VPS26B-206ENST00000531741 CRLF1O75462 422 aa11.78□□□□□ -0.52
VPS26B-206ENST00000531741 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.52
VPS26B-206ENST00000531741 TRAV13-2A0A0B4J235 113 aa11.77□□□□□ -0.53
VPS26B-206ENST00000531741 X6R8D5 127 aa11.77□□□□□ -0.53
VPS26B-206ENST00000531741 FAM240AA0A1B0GVK7 77 aa11.76□□□□□ -0.53
VPS26B-206ENST00000531741 DEFB130BP0DP73 79 aa11.76□□□□□ -0.53
VPS26B-206ENST00000531741 DEFB130AP0DP74 79 aa11.76□□□□□ -0.53
VPS26B-206ENST00000531741 CITED1Q99966 193 aa11.76□□□□□ -0.53
VPS26B-206ENST00000531741 A0A1B0GUV1 79 aa11.75□□□□□ -0.53
VPS26B-206ENST00000531741 TRACP01848 142 aa11.75□□□□□ -0.53
VPS26B-206ENST00000531741 CKS1BP61024 79 aa11.75□□□□□ -0.53
VPS26B-206ENST00000531741 MTORP42345 2549 aa11.75□□□□□ -0.53
VPS26B-206ENST00000531741 SETD2Q9BYW2 2564 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-206ENST00000531741 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
VPS26B-206ENST00000531741 C2CD3Q4AC94 2353 aa11.75□□□□□ -0.53
VPS26B-206ENST00000531741 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
VPS26B-206ENST00000531741 GYPEP15421 78 aa11.74□□□□□ -0.53
VPS26B-206ENST00000531741 MIR7-3HGQ8N6C7 128 aa11.74□□□□□ -0.53
VPS26B-206ENST00000531741 PRO0255Q9UI72 69 aa11.74□□□□□ -0.53
VPS26B-206ENST00000531741 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
VPS26B-206ENST00000531741 RPL28P46779 137 aaKnown RBP11.73□□□□□ -0.53
VPS26B-206ENST00000531741 SMR3AQ99954 134 aa11.73□□□□□ -0.53
VPS26B-206ENST00000531741 TOMM7Q9P0U1 55 aa11.73□□□□□ -0.53
VPS26B-206ENST00000531741 NIPBLQ6KC79 2804 aaeCLIP11.73□□□□□ -0.53
VPS26B-206ENST00000531741 LYRM9A8MSI8 78 aa11.72□□□□□ -0.53
VPS26B-206ENST00000531741 CRPP02741 224 aa11.72□□□□□ -0.53
VPS26B-206ENST00000531741 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
VPS26B-206ENST00000531741 C9orf66Q5T8R8 295 aa11.72□□□□□ -0.53
VPS26B-206ENST00000531741 LINC01561Q8N1V8 128 aa11.72□□□□□ -0.53
VPS26B-206ENST00000531741 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
VPS26B-206ENST00000531741 ITPR2Q14571 2701 aa11.71□□□□□ -0.54
VPS26B-206ENST00000531741 IGKV2-28A0A075B6P5 120 aa11.71□□□□□ -0.54
VPS26B-206ENST00000531741 SNCGO76070 127 aa11.71□□□□□ -0.54
VPS26B-206ENST00000531741 IGKV2D-28P01615 120 aa11.71□□□□□ -0.54
VPS26B-206ENST00000531741 LY6G6DO95868 133 aa11.7□□□□□ -0.54
VPS26B-206ENST00000531741 LINC00158P58513 81 aa11.7□□□□□ -0.54
VPS26B-206ENST00000531741 LINC00337Q8N6G1 96 aa11.7□□□□□ -0.54
VPS26B-206ENST00000531741 SS18Q15532 418 aa11.69□□□□□ -0.54
VPS26B-206ENST00000531741 Q6Q795 121 aa11.69□□□□□ -0.54
VPS26B-206ENST00000531741 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
VPS26B-206ENST00000531741 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
VPS26B-206ENST00000531741 CCL18P55774 89 aa11.69□□□□□ -0.54
VPS26B-206ENST00000531741 UNC79Q9P2D8 2635 aa11.68□□□□□ -0.54
VPS26B-206ENST00000531741 TRAV26-1A0A087WT03 109 aa11.68□□□□□ -0.54
VPS26B-206ENST00000531741 Q8IZM0 81 aa11.67□□□□□ -0.54
VPS26B-206ENST00000531741 PAX4O43316 350 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 ACYP1P07311 99 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 GAGE2BQ13066 116 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 FAM218AQ96MZ4 157 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 C6orf226Q5I0X4 101 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
VPS26B-206ENST00000531741 BAALC-AS2P0C853 105 aa11.65□□□□□ -0.54
VPS26B-206ENST00000531741 XCL1P47992 114 aa11.64□□□□□ -0.55
VPS26B-206ENST00000531741 APOC4P55056 127 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms