RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PRR34Q9NV39 138 aa13.98□□□□□ -0.17
SMCO4-203ENST00000526869 IGKV3OR2-268A0A0C4DH90 116 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 IGLL5B9A064 214 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 IGHV3-30-3P0DP02 117 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 TSPEAR-AS2P59090 65 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 REG3AQ06141 175 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 Q8N3U1 123 aa13.97□□□□□ -0.17
SMCO4-203ENST00000526869 IGHV3OR16-9A0A0B4J2B5 98 aa13.96□□□□□ -0.17
SMCO4-203ENST00000526869 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
SMCO4-203ENST00000526869 SMIM1B2RUZ4 78 aa13.95□□□□□ -0.18
SMCO4-203ENST00000526869 LINC01556Q5JQF7 62 aa13.95□□□□□ -0.18
SMCO4-203ENST00000526869 LINC01561Q8N1V8 128 aa13.95□□□□□ -0.18
SMCO4-203ENST00000526869 PRKDCP78527 4128 aaKnown RBP13.95□□□□□ -0.18
SMCO4-203ENST00000526869 A0A087WZ39 114 aa13.94□□□□□ -0.18
SMCO4-203ENST00000526869 TRAV8-3A0A0A6YYJ7 113 aa13.94□□□□□ -0.18
SMCO4-203ENST00000526869 CCL18P55774 89 aa13.94□□□□□ -0.18
SMCO4-203ENST00000526869 IGHV3-64A0A075B6Q5 118 aa13.93□□□□□ -0.18
SMCO4-203ENST00000526869 M0R143 59 aa13.93□□□□□ -0.18
SMCO4-203ENST00000526869 CLPSL2Q6UWE3 100 aa13.93□□□□□ -0.18
SMCO4-203ENST00000526869 KLK12Q9UKR0 248 aa13.93□□□□□ -0.18
SMCO4-203ENST00000526869 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
SMCO4-203ENST00000526869 ZFAND6Q6FIF0 208 aa13.92□□□□□ -0.18
SMCO4-203ENST00000526869 CD164L2Q6UWJ8 174 aa13.92□□□□□ -0.18
SMCO4-203ENST00000526869 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
SMCO4-203ENST00000526869 DYNC2H1Q8NCM8 4307 aaKnown RBP13.91□□□□□ -0.18
SMCO4-203ENST00000526869 NUPR2A6NF83 97 aa13.91□□□□□ -0.18
SMCO4-203ENST00000526869 IGHV3-30P01768 117 aa13.91□□□□□ -0.18
SMCO4-203ENST00000526869 IGHV3-33P01772 117 aa13.91□□□□□ -0.18
SMCO4-203ENST00000526869 IGHV3-30-5P0DP03 117 aa13.91□□□□□ -0.18
SMCO4-203ENST00000526869 HSD52Q0P140 79 aa13.91□□□□□ -0.18
SMCO4-203ENST00000526869 LINC00588Q9Y4M8 146 aa13.91□□□□□ -0.18
SMCO4-203ENST00000526869 TRAV8-4A0A0B4J246 113 aa13.9□□□□□ -0.18
SMCO4-203ENST00000526869 XCL1P47992 114 aa13.9□□□□□ -0.18
SMCO4-203ENST00000526869 CHCHD10Q8WYQ3 142 aaPredicted RBP13.9□□□□□ -0.18
SMCO4-203ENST00000526869 CRPP02741 224 aa13.89□□□□□ -0.19
SMCO4-203ENST00000526869 TAL2Q16559 108 aa13.89□□□□□ -0.19
SMCO4-203ENST00000526869 ENHOQ6UWT2 76 aa13.89□□□□□ -0.19
SMCO4-203ENST00000526869 SNHG12Q9BXW3 62 aa13.89□□□□□ -0.19
SMCO4-203ENST00000526869 MIAQ16674 131 aa13.88□□□□□ -0.19
SMCO4-203ENST00000526869 SCGB1D4Q6XE38 83 aa13.88□□□□□ -0.19
SMCO4-203ENST00000526869 NDUFA12Q9UI09 145 aa13.88□□□□□ -0.19
SMCO4-203ENST00000526869 APLNQ9ULZ1 77 aa13.88□□□□□ -0.19
SMCO4-203ENST00000526869 KLK5Q9Y337 293 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-203ENST00000526869 EREGO14944 169 aa13.87□□□□□ -0.19
SMCO4-203ENST00000526869 NDUFA1O15239 70 aa13.87□□□□□ -0.19
SMCO4-203ENST00000526869 LBHQ53QV2 105 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-203ENST00000526869 COX7A2LO14548 114 aa13.86□□□□□ -0.19
SMCO4-203ENST00000526869 C5orf38Q86SI9 138 aa13.86□□□□□ -0.19
SMCO4-203ENST00000526869 FOXI1Q12951 378 aa13.85□□□□□ -0.19
SMCO4-203ENST00000526869 C10orf126Q8N4M7 172 aa13.85□□□□□ -0.19
SMCO4-203ENST00000526869 UBE2WQ96B02 151 aa13.85□□□□□ -0.19
SMCO4-203ENST00000526869 HINT1P49773 126 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-203ENST00000526869 BVES-AS1Q5T3Y7 98 aa13.84□□□□□ -0.19
SMCO4-203ENST00000526869 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
SMCO4-203ENST00000526869 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-203ENST00000526869 IGLV10-54A0A075B6I4 117 aa13.83□□□□□ -0.2
SMCO4-203ENST00000526869 A0A0J9YXY3 114 aa13.83□□□□□ -0.2
SMCO4-203ENST00000526869 GAGE12HA6NDE8 117 aa13.82□□□□□ -0.2
SMCO4-203ENST00000526869 K7EP13 123 aa13.82□□□□□ -0.2
SMCO4-203ENST00000526869 HERV-K104P63124 156 aa13.82□□□□□ -0.2
SMCO4-203ENST00000526869 SFTA2Q6UW10 78 aa13.82□□□□□ -0.2
SMCO4-203ENST00000526869 ZNF625Q96I27 306 aaPredicted RBP13.82□□□□□ -0.2
SMCO4-203ENST00000526869 TIMM17BO60830 172 aa13.81□□□□□ -0.2
SMCO4-203ENST00000526869 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
SMCO4-203ENST00000526869 BATFQ16520 125 aa13.8□□□□□ -0.2
SMCO4-203ENST00000526869 Q8IZM0 81 aa13.8□□□□□ -0.2
SMCO4-203ENST00000526869 ORAOV1Q8WV07 137 aa13.8□□□□□ -0.2
SMCO4-203ENST00000526869 HIST1H4GQ99525 98 aa13.8□□□□□ -0.2
SMCO4-203ENST00000526869 TM2D2Q9BX73 214 aa13.8□□□□□ -0.2
SMCO4-203ENST00000526869 IBA57-AS1B1ANH7 110 aa13.79□□□□□ -0.2
SMCO4-203ENST00000526869 APOMO95445 188 aa13.79□□□□□ -0.2
SMCO4-203ENST00000526869 CEND1Q8N111 149 aa13.79□□□□□ -0.2
SMCO4-203ENST00000526869 Q9H8V8 135 aa13.79□□□□□ -0.2
SMCO4-203ENST00000526869 MALP21145 153 aa13.78□□□□□ -0.2
SMCO4-203ENST00000526869 KRTAP26-1Q6PEX3 210 aa13.78□□□□□ -0.2
SMCO4-203ENST00000526869 DNAH7Q8WXX0 4024 aa13.78□□□□□ -0.2
SMCO4-203ENST00000526869 COL5A1-AS1Q5SY13 56 aa13.77□□□□□ -0.21
SMCO4-203ENST00000526869 TOMM7Q9P0U1 55 aa13.77□□□□□ -0.21
SMCO4-203ENST00000526869 PRSS2P07478 247 aa13.76□□□□□ -0.21
SMCO4-203ENST00000526869 GCSHP23434 173 aa13.76□□□□□ -0.21
SMCO4-203ENST00000526869 SRSF9Q13242 221 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMCO4-203ENST00000526869 Q6ZVH6 145 aa13.76□□□□□ -0.21
SMCO4-203ENST00000526869 LITAFQ99732 161 aa13.76□□□□□ -0.21
SMCO4-203ENST00000526869 C1orf43Q9BWL3 253 aa13.76□□□□□ -0.21
SMCO4-203ENST00000526869 CXCL5P42830 114 aa13.75□□□□□ -0.21
SMCO4-203ENST00000526869 UBE2DNLQ8IWF7 75 aa13.75□□□□□ -0.21
SMCO4-203ENST00000526869 SPANXDQ9BXN6 97 aa13.75□□□□□ -0.21
SMCO4-203ENST00000526869 SPANXCQ9NY87 97 aa13.75□□□□□ -0.21
SMCO4-203ENST00000526869 CIRBPQ14011 172 aaKnown RBP13.74□□□□□ -0.21
SMCO4-203ENST00000526869 C6orf226Q5I0X4 101 aa13.74□□□□□ -0.21
SMCO4-203ENST00000526869 A6NDN8 102 aa13.73□□□□□ -0.21
SMCO4-203ENST00000526869 KIAA0087Q14695 138 aa13.73□□□□□ -0.21
SMCO4-203ENST00000526869 RMI2Q96E14 147 aa13.73□□□□□ -0.21
SMCO4-203ENST00000526869 FXYD2P54710 66 aa13.72□□□□□ -0.21
SMCO4-203ENST00000526869 CFAP161Q6P656 301 aa13.72□□□□□ -0.21
SMCO4-203ENST00000526869 TMEM238LA0A1B0GVL6 79 aa13.7□□□□□ -0.22
SMCO4-203ENST00000526869 A6NJY4 79 aa13.7□□□□□ -0.22
SMCO4-203ENST00000526869 PTTG1IPP53801 180 aa13.7□□□□□ -0.22
SMCO4-203ENST00000526869 IGKV2D-24A0A075B6R9 120 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms