RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 G3V318 75 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 COX6CP09669 75 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 LGALS3P17931 250 aaKnown RBP3.37□□□□□ -1.87
CNOT8-220ENST00000522139 PSMB8P28062 276 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 INSL3P51460 131 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 FAM222AQ5U5X8 452 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 AMTNQ6UX39 209 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 TEX29Q8N6K0 151 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 RPL39LQ96EH5 51 aaKnown RBP3.37□□□□□ -1.87
CNOT8-220ENST00000522139 DMXL1Q9Y485 3027 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 LAMA5O15230 3695 aa3.37□□□□□ -1.87
CNOT8-220ENST00000522139 J3QLI3 93 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 LST1O00453 97 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 PSMB2P49721 201 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 TSPEAR-AS2P59090 65 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 SNRPD3P62318 126 aaKnown RBP3.36□□□□□ -1.87
CNOT8-220ENST00000522139 MIAQ16674 131 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 TMEM170BQ5T4T1 132 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 SFTA2Q6UW10 78 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 UNQ9165/PRO28630Q6UXU0 137 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 C15orf53Q8NAA6 179 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 S4R3C0 116 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 HIVEP3Q5T1R4 2406 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 PRRC2AP48634 2157 aaKnown RBP3.36□□□□□ -1.87
CNOT8-220ENST00000522139 ASPMQ8IZT6 3477 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 LRBAP50851 2863 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.871e-5■■■■□ 21.5
CNOT8-220ENST00000522139 SPTBN2O15020 2390 aa3.36□□□□□ -1.87
CNOT8-220ENST00000522139 COL6A6A6NMZ7 2263 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 TRAV4A0A0B4J268 109 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 LOC107984156A0A0G2JMH3 177 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 TRBV10-1A0A0K0K1A3 114 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 NDUFA1O15239 70 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 GNRH2O43555 120 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 IGHV3-53P01767 116 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 TRACP01848 142 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 MT-ATP8P03928 68 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 IGHV3-30-3P0DP02 117 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 CXCL5P42830 114 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 ARL17AQ8IVW1 177 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 DAND5Q8N907 189 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 UBE2E2Q96LR5 201 aa3.35□□□□□ -1.87
CNOT8-220ENST00000522139 ABCA2Q9BZC7 2435 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 DOPEY2Q9Y3R5 2298 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 SNCGO76070 127 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.87
CNOT8-220ENST00000522139 C2orf82Q6UX34 121 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 MUSTN1Q8IVN3 82 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 Q8N2B8 174 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 C10orf105Q8TEF2 133 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 BPESC1Q9GZL8 116 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 TMEM126AQ9H061 195 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 MUC6Q6W4X9 2439 aa3.34□□□□□ -1.87
CNOT8-220ENST00000522139 ZFHX2Q9C0A1 2572 aaPredicted RBP3.33□□□□□ -1.88
CNOT8-220ENST00000522139 TRAV25A0A0B4J276 109 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 B4DSR2 109 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 C9JAW5 83 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 F6UB75 175 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 H3BMM0 161 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 MGPP08493 103 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 RPL39P62891 51 aaKnown RBP3.33□□□□□ -1.88
CNOT8-220ENST00000522139 HERVK_113P63121 156 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 Q6ZQT7 251 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 UBE2WQ96B02 151 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 ANAPC13Q9BS18 74 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 ICOSQ9Y6W8 199 aa3.33□□□□□ -1.88
CNOT8-220ENST00000522139 SPTAN1Q13813 2472 aaKnown RBP3.33□□□□□ -1.88
CNOT8-220ENST00000522139 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 A0A1B0GX51 115 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 COX7A2LO14548 114 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 LY6HO94772 140 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 TRBV12-3P01733 135 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 MSMBP08118 114 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 CMC4P56277 68 aaPredicted RBP3.32□□□□□ -1.88
CNOT8-220ENST00000522139 PRB3Q04118 309 aaPredicted RBP3.32□□□□□ -1.88
CNOT8-220ENST00000522139 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 LINC00643Q86TS7 51 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 CHCHD7Q9BUK0 85 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 NDUFA12Q9UI09 145 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 MED13LQ71F56 2210 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 CREBBPQ92793 2442 aa3.32□□□□□ -1.88
CNOT8-220ENST00000522139 DOPEY1Q5JWR5 2465 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 TRAV8-4A0A0B4J246 113 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 TRAV12-3A0A0B4J271 114 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 IGHV3-66A0A0C4DH42 116 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 A0A0J9YXV3 536 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 INAFM2P0DMQ5 153 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 RPL28P46779 137 aaKnown RBP3.31□□□□□ -1.88
CNOT8-220ENST00000522139 RPS28P62857 69 aaKnown RBP3.31□□□□□ -1.88
CNOT8-220ENST00000522139 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 DAZ4Q86SG3 579 aaKnown RBP3.31□□□□□ -1.88
CNOT8-220ENST00000522139 C5orf38Q86SI9 138 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 TMEM86BQ8N661 226 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 MUC7Q8TAX7 377 aa3.31□□□□□ -1.88
CNOT8-220ENST00000522139 OBSCN-AS1Q96MR7 158 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms