RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
CNOT8-220ENST00000522139 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
CNOT8-220ENST00000522139 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
CNOT8-220ENST00000522139 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
CNOT8-220ENST00000522139 FOXD1Q16676 465 aa18.75■□□□□ 0.59
CNOT8-220ENST00000522139 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
CNOT8-220ENST00000522139 ADRA2BP18089 450 aa17.86■□□□□ 0.45
CNOT8-220ENST00000522139 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
CNOT8-220ENST00000522139 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
CNOT8-220ENST00000522139 MSH5O43196 834 aa17.44■□□□□ 0.38
CNOT8-220ENST00000522139 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
CNOT8-220ENST00000522139 KCNA4P22459 653 aa16.41■□□□□ 0.22
CNOT8-220ENST00000522139 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
CNOT8-220ENST00000522139 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
CNOT8-220ENST00000522139 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
CNOT8-220ENST00000522139 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
CNOT8-220ENST00000522139 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
CNOT8-220ENST00000522139 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
CNOT8-220ENST00000522139 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
CNOT8-220ENST00000522139 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
CNOT8-220ENST00000522139 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
CNOT8-220ENST00000522139 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
CNOT8-220ENST00000522139 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
CNOT8-220ENST00000522139 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
CNOT8-220ENST00000522139 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
CNOT8-220ENST00000522139 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
CNOT8-220ENST00000522139 ZBTB22O15209 634 aa15.13■□□□□ 0.01
CNOT8-220ENST00000522139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.011e-8■□□□□ 11.1
CNOT8-220ENST00000522139 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
CNOT8-220ENST00000522139 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
CNOT8-220ENST00000522139 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
CNOT8-220ENST00000522139 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
CNOT8-220ENST00000522139 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
CNOT8-220ENST00000522139 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
CNOT8-220ENST00000522139 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
CNOT8-220ENST00000522139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
CNOT8-220ENST00000522139 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
CNOT8-220ENST00000522139 APLP2Q06481 763 aa14.46□□□□□ -0.09
CNOT8-220ENST00000522139 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
CNOT8-220ENST00000522139 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
CNOT8-220ENST00000522139 CAPN15O75808 1086 aa14.31□□□□□ -0.12
CNOT8-220ENST00000522139 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
CNOT8-220ENST00000522139 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
CNOT8-220ENST00000522139 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
CNOT8-220ENST00000522139 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
CNOT8-220ENST00000522139 DSG3P32926 999 aa14.09□□□□□ -0.15
CNOT8-220ENST00000522139 ABCB7O75027 752 aa13.99□□□□□ -0.17
CNOT8-220ENST00000522139 POLA2Q14181 598 aa13.9□□□□□ -0.18
CNOT8-220ENST00000522139 FKBP8Q14318 412 aa13.88□□□□□ -0.19
CNOT8-220ENST00000522139 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
CNOT8-220ENST00000522139 FBLN2P98095 1184 aa13.61□□□□□ -0.23
CNOT8-220ENST00000522139 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
CNOT8-220ENST00000522139 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
CNOT8-220ENST00000522139 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
CNOT8-220ENST00000522139 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
CNOT8-220ENST00000522139 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
CNOT8-220ENST00000522139 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
CNOT8-220ENST00000522139 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
CNOT8-220ENST00000522139 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
CNOT8-220ENST00000522139 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
CNOT8-220ENST00000522139 PROM2Q8N271 834 aa13.32□□□□□ -0.28
CNOT8-220ENST00000522139 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
CNOT8-220ENST00000522139 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
CNOT8-220ENST00000522139 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
CNOT8-220ENST00000522139 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
CNOT8-220ENST00000522139 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
CNOT8-220ENST00000522139 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
CNOT8-220ENST00000522139 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
CNOT8-220ENST00000522139 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
CNOT8-220ENST00000522139 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
CNOT8-220ENST00000522139 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
CNOT8-220ENST00000522139 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
CNOT8-220ENST00000522139 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
CNOT8-220ENST00000522139 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
CNOT8-220ENST00000522139 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
CNOT8-220ENST00000522139 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
CNOT8-220ENST00000522139 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
CNOT8-220ENST00000522139 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
CNOT8-220ENST00000522139 POTEHQ6S545 545 aa12.74□□□□□ -0.37
CNOT8-220ENST00000522139 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
CNOT8-220ENST00000522139 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
CNOT8-220ENST00000522139 MIER1Q8N108 512 aa12.69□□□□□ -0.38
CNOT8-220ENST00000522139 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
CNOT8-220ENST00000522139 PKD2Q13563 968 aa12.67□□□□□ -0.38
CNOT8-220ENST00000522139 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
CNOT8-220ENST00000522139 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
CNOT8-220ENST00000522139 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
CNOT8-220ENST00000522139 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
CNOT8-220ENST00000522139 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
CNOT8-220ENST00000522139 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
CNOT8-220ENST00000522139 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
CNOT8-220ENST00000522139 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
CNOT8-220ENST00000522139 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
CNOT8-220ENST00000522139 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
CNOT8-220ENST00000522139 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
CNOT8-220ENST00000522139 HAX1O00165 279 aa12.39□□□□□ -0.43
CNOT8-220ENST00000522139 RGL2O15211 777 aa12.38□□□□□ -0.43
CNOT8-220ENST00000522139 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
CNOT8-220ENST00000522139 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
CNOT8-220ENST00000522139 NUBP1P53384 320 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms