RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 EMP1P54849 157 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 GAGE4Q13068 117 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 GAGE5Q13069 117 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 SRSF9Q13242 221 aaKnown RBP eCLIP4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 AMMECR1LQ6DCA0 310 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 PRO0255Q9UI72 69 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 SETXQ7Z333 2677 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 IGLL5B9A064 214 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 H3BUT2 72 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 NDUFA1O15239 70 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 LINC00242Q5T6M2 205 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 CEMP1Q6PRD7 247 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 SH2D6Q7Z4S9 175 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 COPS9Q8WXC6 57 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 NF1P21359 2839 aa4.7□□□□□ -1.66
CTNNA1-228ENST00000521640 A0A1B0GUV1 79 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 TRIAP1O43715 76 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 IFITM1P13164 125 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 HERV-K104P63124 156 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 EGFEM1PQ0D2K5 195 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 LINC01561Q8N1V8 128 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 C10orf126Q8N4M7 172 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 Q8NAQ8 132 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 DEFB104AQ8WTQ1 72 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 SPCS1Q9Y6A9 102 aa4.69□□□□□ -1.66
CTNNA1-228ENST00000521640 FAM222AQ5U5X8 452 aa4.68□□□□□ -1.66
CTNNA1-228ENST00000521640 ATP6V0E2Q8NHE4 81 aa4.68□□□□□ -1.66
CTNNA1-228ENST00000521640 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
CTNNA1-228ENST00000521640 LITAFQ99732 161 aa4.68□□□□□ -1.66
CTNNA1-228ENST00000521640 CDKN2A-AS1Q9UH64 79 aa4.68□□□□□ -1.66
CTNNA1-228ENST00000521640 NOTCH2Q04721 2471 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 IGHV4-28A0A0C4DH34 117 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 F5H768 121 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 K7ERJ3 54 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 ATP5G1P05496 136 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 SPART-AS1P0CW21 52 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 IGHV4-30-4P0DP06 118 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 DEFB130BP0DP73 79 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 DEFB130AP0DP74 79 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 CIRBPQ14011 172 aaKnown RBP4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 MIAQ16674 131 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 DEFB135Q30KP9 77 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 SPATA3Q8NHX4 192 aa4.67□□□□□ -1.66
CTNNA1-228ENST00000521640 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 TRAV8-3A0A0A6YYJ7 113 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 LOC100131303A0A0U1RQF7 123 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 F8W1H4 67 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 H3BNG1 76 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 SPINK8P0C7L1 97 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 DAD1P61803 113 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 KRTAP24-1Q3LI83 254 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 RNASE13Q5GAN3 156 aaKnown RBP4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 PRO1854Q9UHT4 67 aa4.66□□□□□ -1.66
CTNNA1-228ENST00000521640 A0A087WZ39 114 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 IGHV3OR16-9A0A0B4J2B5 98 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 A4D1N5 150 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 TSPAN13O95857 204 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 CFC1BP0CG36 223 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 CFC1P0CG37 223 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 COX6A2Q02221 97 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 ZNF625Q96I27 306 aaPredicted RBP4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 CHCHD5Q9BSY4 110 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 C11orf68Q9H3H3 251 aaKnown RBP4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 SETD2Q9BYW2 2564 aaPredicted RBP4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 JMJD1CQ15652 2540 aa4.65□□□□□ -1.67
CTNNA1-228ENST00000521640 IGHV3-64A0A075B6Q5 118 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 TRAV13-1A0A0B4J241 112 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 K7ERU9 68 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 M0QXV9 152 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 GAGE6Q13070 117 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 CFAP161Q6P656 301 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 MUSTN1Q8IVN3 82 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 C3orf56Q8N813 242 aa4.64□□□□□ -1.67
CTNNA1-228ENST00000521640 IGLV4-60A0A075B6I1 120 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 TRBV30A0A0K0K1B3 111 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 LINC00959A0A1B0GUT2 108 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 APOMO95445 188 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 IGHV3-33P01772 117 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 RBX1P62877 108 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 SS18Q15532 418 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 LELP1Q5T871 98 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 LINC01600Q96MT4 127 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 Q9H8V8 135 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 ERG28Q9UKR5 140 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 ICOSQ9Y6W8 199 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 CUBNO60494 3623 aa4.63□□□□□ -1.67
CTNNA1-228ENST00000521640 OCIAD2Q56VL3 154 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms