RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 CDC42SE2Q9NRR3 84 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 LYSTQ99698 3801 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 TMEM223A0PJW6 202 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 LEPROTO15243 131 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 ZNF22P17026 224 aaPredicted RBP5.85□□□□□ -1.47
VAPB-206ENST00000520497 TCTAP57738 103 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 CTAG1AP78358 180 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 SS18Q15532 418 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 RNASE13Q5GAN3 156 aaKnown RBP5.85□□□□□ -1.47
VAPB-206ENST00000520497 FAM19A3Q7Z5A8 133 aa5.85□□□□□ -1.47
VAPB-206ENST00000520497 TRAV13-1A0A0B4J241 112 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 MYMXA0A1B0GTQ4 84 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 NUPR2A6NF83 97 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 ZNF815PA8K554 130 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 IGLL5B9A064 214 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 HSD52Q0P140 79 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 ESRGQ1W209 222 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 SCGB1D4Q6XE38 83 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 Q8N3U1 123 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 HIGD1BQ9P298 99 aa5.84□□□□□ -1.47
VAPB-206ENST00000520497 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.48
VAPB-206ENST00000520497 IGLV5-45A0A087WSX0 123 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 J3QQQ9 107 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 RBX1P62877 108 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 MPV17L2Q567V2 206 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 PCP2Q8IVA1 136 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 APLNQ9ULZ1 77 aa5.83□□□□□ -1.48
VAPB-206ENST00000520497 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 IGHV1-58A0A0C4DH39 117 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 BATFQ16520 125 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 TAL2Q16559 108 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 ZFAND6Q6FIF0 208 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 KRTAP9-9Q9BYP9 154 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
VAPB-206ENST00000520497 IGKV3OR2-268A0A0C4DH90 116 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 CRPP02741 224 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 ANGP03950 147 aaKnown RBP5.81□□□□□ -1.48
VAPB-206ENST00000520497 COL5A1-AS1Q5SY13 56 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 CASC10Q5T4H9 136 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 LINC00242Q5T6M2 205 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 WFDC10BQ8IUB3 73 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 KLK5Q9Y337 293 aaPredicted RBP5.81□□□□□ -1.48
VAPB-206ENST00000520497 LINC00588Q9Y4M8 146 aa5.81□□□□□ -1.48
VAPB-206ENST00000520497 EPPK1P58107 5090 aaKnown RBP5.8□□□□□ -1.48
VAPB-206ENST00000520497 IGHV3-64A0A075B6Q5 118 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 A6NDN8 102 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 SPINK8P0C7L1 97 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 GCSHP23434 173 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 HINT1P49773 126 aaPredicted RBP5.8□□□□□ -1.48
VAPB-206ENST00000520497 SFTA2Q6UW10 78 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 C2orf91Q6ZV80 131 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 MUC7Q8TAX7 377 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 HIST1H4GQ99525 98 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 UPK3BQ9BT76 320 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 CDKN2A-AS1Q9UH64 79 aa5.8□□□□□ -1.48
VAPB-206ENST00000520497 LINC00959A0A1B0GUT2 108 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 TMEM238C9JI98 176 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 C3orf84H3BNL1 204 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 CCL18P55774 89 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 REG3AQ06141 175 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 SRSF9Q13242 221 aaKnown RBP eCLIP5.79□□□□□ -1.48
VAPB-206ENST00000520497 CIRBPQ14011 172 aaKnown RBP5.79□□□□□ -1.48
VAPB-206ENST00000520497 LINC01556Q5JQF7 62 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 LINC01561Q8N1V8 128 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 COPS9Q8WXC6 57 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 SNHG12Q9BXW3 62 aa5.79□□□□□ -1.48
VAPB-206ENST00000520497 PLECQ15149 4684 aaKnown RBP5.79□□□□□ -1.48
VAPB-206ENST00000520497 TRAV8-4A0A0B4J246 113 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 EREGO14944 169 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 PRSS2P07478 247 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 DNAH10OSP0CZ25 163 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 PTTG1IPP53801 180 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 HERV-K104P63124 156 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 LINC00269Q8N2A0 174 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 MAPKAPK5-AS1Q8N8E1 139 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 ORAOV1Q8WV07 137 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 PRR34Q9NV39 138 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
VAPB-206ENST00000520497 A0A087WZ39 114 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 TRAV8-3A0A0A6YYJ7 113 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 SMIM1B2RUZ4 78 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 COX7A2LO14548 114 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 NDUFA1O15239 70 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 APOMO95445 188 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 MALP21145 153 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 COX6A2Q02221 97 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 BVES-AS1Q5T3Y7 98 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 CD164L2Q6UWJ8 174 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 TTTY13Q9BZ97 58 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 SPANXB1Q9NS25 103 aaPredicted RBP5.77□□□□□ -1.49
VAPB-206ENST00000520497 HYDINQ4G0P3 5121 aa5.77□□□□□ -1.49
VAPB-206ENST00000520497 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 1762.6 ms