RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 C1orf167Q5SNV9 1468 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 SHANK2Q9UPX8 1470 aa1.5□□□□□ -2.17
HMGB1P46-201ENST00000520062 NRXN2Q9P2S2 1712 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 MYOM1P52179 1685 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 ITSN2Q9NZM3 1697 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 LOC285556D6RIA3 1793 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 ANKRD36CQ5JPF3 1778 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 COL6A6A6NMZ7 2263 aa1.49□□□□□ -2.17
HMGB1P46-201ENST00000520062 TOP2BQ02880 1626 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 TRAV12-3A0A0B4J271 114 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 A0A0D9SFI3 127 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 HIGD1CA8MV81 97 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 TMEM14DPA8MWL7 114 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 HMGN2P05204 90 aaKnown RBP1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 COX8AP10176 69 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 EFNA4P52798 201 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 EDDM3BP56851 147 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 ELOF1P60002 83 aaKnown RBP1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 C10orf128Q5T292 105 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 C6orf201Q7Z4U5 140 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 Q86TA4 180 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 AMELXQ99217 191 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 TOP2AP11388 1531 aaKnown RBP1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 DLEC1Q9Y238 1755 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 CACNA1CQ13936 2221 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 CROCC2H7BZ55 1655 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 HELZ2Q9BYK8 2649 aaKnown RBP1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 LRRC37A3O60309 1634 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 LAMC1P11047 1609 aa1.48□□□□□ -2.17
HMGB1P46-201ENST00000520062 MAST1Q9Y2H9 1570 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 CDK13Q14004 1512 aaKnown RBP1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 NUP188Q5SRE5 1749 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 A0A0G2JND7 137 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 A0A1B0GWA3 101 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 ZNF815PA8K554 130 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 ZNF56Q15929 161 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 IFI27L1Q96BM0 104 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 CDC42SE2Q9NRR3 84 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 V9GYH0 126 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 MROH2AA6NES4 1674 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 E9PCH4 1651 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 NHSQ6T4R5 1651 aa1.47□□□□□ -2.17
HMGB1P46-201ENST00000520062 IFT172Q9UG01 1749 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 CRYBG1Q9Y4K1 1723 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 ASXL1Q8IXJ9 1541 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 SHPRHQ149N8 1683 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 ALS2Q96Q42 1657 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 MED13LQ71F56 2210 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 FLG2Q5D862 2391 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 MYMXA0A1B0GTQ4 84 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 CHKB-CPT1BH3BT56 60 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 IGHV3-30P01768 117 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 SAA2P0DJI9 122 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 IGHV3-30-5P0DP03 117 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 UBE2D1P51668 147 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 Q5VV11 94 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 TMEM14BQ9NUH8 114 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 LENEPQ9Y5L5 61 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 UGGT1Q9NYU2 1555 aa1.46□□□□□ -2.18
HMGB1P46-201ENST00000520062 NEXMIFQ5QGS0 1516 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 CTTNBP2Q8WZ74 1663 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 BCORQ6W2J9 1755 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 TEX49A0A1B0GTD5 131 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 CEBPZOSA8MTT3 80 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 SNRPGP15A8MWD9 76 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 FXYD1O00168 92 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 IGLV3-1P01715 115 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 GCHFRP30047 84 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 PLGLAQ15195 96 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 ATP5EP2Q5VTU8 51 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 FAM223AQ8IWN6 122 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 C20orf197Q8N268 126 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 PPP1R1CQ8WVI7 109 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 MRPL36Q9P0J6 103 aaKnown RBP1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 GLI2P10070 1586 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 DIP2AQ14689 1571 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 PKD1L3Q7Z443 1732 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 HMGXB3Q12766 1538 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 RREB1Q92766 1687 aa1.45□□□□□ -2.18
HMGB1P46-201ENST00000520062 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 CICQ96RK0 1608 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 RALGAPBQ86X10 1494 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 IQCF6A8MYZ5 107 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 F8WEM9 126 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 C3orf79P0CE67 100 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 PDE6GP18545 87 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 SSBP1Q04837 148 aaKnown RBP1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 Q6JHZ5 121 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 LINC00575Q6W349 94 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 BPESC1Q9GZL8 116 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 PAPPAQ13219 1627 aa1.44□□□□□ -2.18
HMGB1P46-201ENST00000520062 POLR1AO95602 1720 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 TIAM2Q8IVF5 1701 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 PARP4Q9UKK3 1724 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms