RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ENHOQ6UWT2 76 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 PPDPFQ9H3Y8 114 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 CCKP06307 115 aa4.79□□□□□ -1.64
CPNE3-203ENST00000517490 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
CPNE3-203ENST00000517490 KLK5Q9Y337 293 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-203ENST00000517490 CRYGAP11844 174 aa4.79□□□□□ -1.64
CPNE3-203ENST00000517490 FAM19A5Q7Z5A7 132 aaPredicted RBP4.79□□□□□ -1.64
CPNE3-203ENST00000517490 RANBP2P49792 3224 aaKnown RBP4.79□□□□□ -1.64
CPNE3-203ENST00000517490 A0A087WYN8 130 aa4.79□□□□□ -1.64
CPNE3-203ENST00000517490 A0A096LPF7 62 aa4.78□□□□□ -1.64
CPNE3-203ENST00000517490 UNC80Q8N2C7 3258 aa4.78□□□□□ -1.64
CPNE3-203ENST00000517490 DAD1P61803 113 aa4.78□□□□□ -1.64
CPNE3-203ENST00000517490 Q8N2B8 174 aa4.78□□□□□ -1.64
CPNE3-203ENST00000517490 SPG11Q96JI7 2443 aa4.78□□□□□ -1.64
CPNE3-203ENST00000517490 SORL1Q92673 2214 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 A0A0U1RQV1 116 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
CPNE3-203ENST00000517490 Q96MF0 132 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 AVPP01185 164 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 LAMA3Q16787 3333 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 A0A087WVE0 104 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 LOC107984640A0A0U1RRK4 108 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 CSPG4Q6UVK1 2322 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 PRYO14603 147 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 LINC00337Q8N6G1 96 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 LINC00846Q9NV44 126 aa4.77□□□□□ -1.65
CPNE3-203ENST00000517490 IGLV10-54A0A075B6I4 117 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 WIPF1O43516 503 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 C11orf72Q8NBR9 251 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 A0A087WZ39 114 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 LINC00959A0A1B0GUT2 108 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 DIRC1Q969H9 104 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 Q8IZM0 81 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
CPNE3-203ENST00000517490 SPAG11BQ08648 103 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 C6orf99Q4VX62 202 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 C18orf65Q6ZTR6 163 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 FAM218AQ96MZ4 157 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 COX17Q14061 63 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 LOC100131303A0A0U1RQF7 123 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 NDUFC1O43677 76 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 ODF3L2Q3SX64 289 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 C1orf158Q8N1D5 194 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 Q8N814 137 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 SMCR5Q8TEV8 140 aa4.75□□□□□ -1.65
CPNE3-203ENST00000517490 CD164Q04900 197 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-203ENST00000517490 C2CD3Q4AC94 2353 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 TRAV7A0A075B6U4 112 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 APOC4P55056 127 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 CHCHD10Q8WYQ3 142 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-203ENST00000517490 COX7BP24311 80 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 NREPQ16612 68 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 DEFB113Q30KQ7 82 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 LINC00269Q8N2A0 174 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 Q9UF83 564 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 DNAH14Q0VDD8 3507 aa4.74□□□□□ -1.65
CPNE3-203ENST00000517490 WNK1Q9H4A3 2382 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 IGHV4-31P0DP07 118 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 Q6ZVQ6 151 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 WFDC9Q8NEX5 89 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 MUC4Q99102 2169 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 TRBV10-3A0A0K0K1G6 114 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 MUC7Q8TAX7 377 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 REG3AQ06141 175 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 NKAPP1Q8N9T2 125 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 SERP1Q9Y6X1 66 aa4.73□□□□□ -1.65
CPNE3-203ENST00000517490 MUC6Q6W4X9 2439 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 IGLV4-60A0A075B6I1 120 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 NTM-AS1Q6ZSK4 140 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 CDH23Q9H251 3354 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 HRCT1Q6UXD1 115 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 FUSP35637 526 aaKnown RBP eCLIP4.72□□□□□ -1.65
CPNE3-203ENST00000517490 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.72□□□□□ -1.65
CPNE3-203ENST00000517490 IL17DQ8TAD2 202 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 CAMK2N2Q96S95 79 aa4.72□□□□□ -1.65
CPNE3-203ENST00000517490 BDP1A6H8Y1 2624 aa4.71□□□□□ -1.65
CPNE3-203ENST00000517490 NDUFS5O43920 106 aa4.71□□□□□ -1.65
CPNE3-203ENST00000517490 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 RMI2Q96E14 147 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 IGHV3OR16-9A0A0B4J2B5 98 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 HIGD2BQ4VC39 106 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 Q6ZQY7 126 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.66
CPNE3-203ENST00000517490 A8MTW9 85 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 ANKRD11Q6UB99 2663 aaPredicted RBP4.7□□□□□ -1.66
CPNE3-203ENST00000517490 BCE1O60756 84 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 FAM19A1Q7Z5A9 133 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 IGF2RP11717 2491 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 IGKV2-28A0A075B6P5 120 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 J3QKU1 62 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 IGKV2D-28P01615 120 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 SNURFQ9Y675 71 aa4.7□□□□□ -1.66
CPNE3-203ENST00000517490 CEP295Q9C0D2 2601 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms