RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
SCARNA20.6-201ENST00000517251 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 CSMD3Q7Z407 3707 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 IGLV4-60A0A075B6I1 120 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRBV20-1A0A075B6N2 111 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 IGKV2-28A0A075B6P5 120 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE12HA6NDE8 117 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE12JA6NER3 117 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LST1O00453 97 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 WIPF1O43516 503 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 IGKV2D-28P01615 120 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 XGP55808 180 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 HERVK_113P63121 156 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 RPL24P83731 157 aaKnown RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE4Q13068 117 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE5Q13069 117 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SRSF9Q13242 221 aaKnown RBP eCLIP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SCGB2A2Q13296 93 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LINC01620Q4KN68 170 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LYRM7Q5U5X0 104 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 DAZ4Q86SG3 579 aaKnown RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 DAND5Q8N907 189 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 KIR2DL5BQ8NHK3 375 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LINC00308Q8TCZ7 52 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 PPDPFLQ8WWR9 84 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 CITED1Q99966 193 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TMEM243Q9BU79 118 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 NOP10Q9NPE3 64 aaKnown RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 DAZ3Q9NR90 486 aaKnown RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 FBN1P35555 2871 aaKnown RBP2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
SCARNA20.6-201ENST00000517251 NBEAL1Q6ZS30 2694 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 FLNBO75369 2602 aaKnown RBP2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 IGHV3OR16-9A0A0B4J2B5 98 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LOC107984156A0A0G2JMH3 177 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 C9JAW5 83 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 H3BT86 120 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 H7C423 109 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SLC25A20O43772 301 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE7O76087 117 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LY6G6DO95868 133 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 MT-ATP8P03928 68 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE12FP0CL80 117 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE12GP0CL81 117 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE12IP0CL82 117 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SCGB1A1P11684 91 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 IFITM1P13164 125 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 HTN1P15515 57 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 RPL35AP18077 110 aaKnown RBP2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 PSMB2P49721 201 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 RPL36AP83881 106 aaKnown RBP2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 DEFB121Q5J5C9 76 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 FAM222AQ5U5X8 452 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 ARL17AQ8IVW1 177 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 Q8N3U1 123 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 Q8NAQ8 132 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 ZNF418Q8TF45 676 aaPredicted RBP2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 CLEC2BQ92478 149 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 RPL36ALQ969Q0 106 aaKnown RBP2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 FAM218AQ96MZ4 157 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SIGMAR1Q99720 223 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 Q9H8V8 135 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 YAE1D1Q9NRH1 226 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 FRAS1Q86XX4 4008 aa2.25□□□□□ -2.05
SCARNA20.6-201ENST00000517251 A0A087WZ39 114 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRBV10-2A0A0K0K1G8 114 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 J3QKU1 62 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 CIDEAO60543 219 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 CRLF1O75462 422 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 NPC2P61916 151 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SS18Q15532 418 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SDIM1Q6ZPB5 146 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LINC00337Q8N6G1 96 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 Q8NDZ9 215 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 NTN5Q8WTR8 489 aaPredicted RBP2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GEMIN7Q9H840 131 aaKnown RBP2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 ERG28Q9UKR5 140 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 CELA1Q9UNI1 258 aa2.24□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRAV13-1A0A0B4J241 112 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 FAM240AA0A1B0GVK7 77 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 H7C2G1 150 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 COX7A2LO14548 114 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 NANOS2P60321 138 aaKnown RBP2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 HERV-K104P63124 156 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 SMAGPQ0VAQ4 97 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 GAGE6Q13070 117 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 KIAA0087Q14695 138 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 ATXN8Q156A1 80 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 COX7B2Q8TF08 81 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 UBE2WQ96B02 151 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 NOTCH1P46531 2555 aa2.23□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRGV2A0A075B6R0 118 aa2.22□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRAV26-1A0A087WT03 109 aa2.22□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TRAV8-4A0A0B4J246 113 aa2.22□□□□□ -2.05
SCARNA20.6-201ENST00000517251 IGHV4-28A0A0C4DH34 117 aa2.22□□□□□ -2.05
SCARNA20.6-201ENST00000517251 TEX49A0A1B0GTD5 131 aa2.22□□□□□ -2.05
SCARNA20.6-201ENST00000517251 LINC00959A0A1B0GUT2 108 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms