RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
TPM3-221ENST00000513769 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
TPM3-221ENST00000513769 CMYA5Q8N3K9 4069 aa6.82□□□□□ -1.32
TPM3-221ENST00000513769 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
TPM3-221ENST00000513769 H3BRM9 83 aa6.82□□□□□ -1.32
TPM3-221ENST00000513769 HTN3P15516 51 aa6.82□□□□□ -1.32
TPM3-221ENST00000513769 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
TPM3-221ENST00000513769 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
TPM3-221ENST00000513769 HIGD1BQ9P298 99 aa6.82□□□□□ -1.32
TPM3-221ENST00000513769 A0A0J9YXV3 536 aa6.81□□□□□ -1.32
TPM3-221ENST00000513769 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
TPM3-221ENST00000513769 NANOS2P60321 138 aaKnown RBP6.81□□□□□ -1.32
TPM3-221ENST00000513769 GAGE6Q13070 117 aa6.81□□□□□ -1.32
TPM3-221ENST00000513769 LINC01561Q8N1V8 128 aa6.81□□□□□ -1.32
TPM3-221ENST00000513769 PLEKHB2Q96CS7 222 aa6.81□□□□□ -1.32
TPM3-221ENST00000513769 LEPROTO15243 131 aa6.8□□□□□ -1.32
TPM3-221ENST00000513769 LINC00242Q5T6M2 205 aa6.8□□□□□ -1.32
TPM3-221ENST00000513769 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
TPM3-221ENST00000513769 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
TPM3-221ENST00000513769 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
TPM3-221ENST00000513769 NMUP48645 174 aa6.79□□□□□ -1.32
TPM3-221ENST00000513769 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
TPM3-221ENST00000513769 TCTAP57738 103 aa6.79□□□□□ -1.32
TPM3-221ENST00000513769 RBX1P62877 108 aa6.79□□□□□ -1.32
TPM3-221ENST00000513769 SS18Q15532 418 aa6.79□□□□□ -1.32
TPM3-221ENST00000513769 Q6ZUT4 128 aa6.79□□□□□ -1.32
TPM3-221ENST00000513769 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
TPM3-221ENST00000513769 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
TPM3-221ENST00000513769 K7EP13 123 aa6.78□□□□□ -1.32
TPM3-221ENST00000513769 M0R143 59 aa6.78□□□□□ -1.32
TPM3-221ENST00000513769 TAL2Q16559 108 aa6.78□□□□□ -1.32
TPM3-221ENST00000513769 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
TPM3-221ENST00000513769 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
TPM3-221ENST00000513769 LINC00959A0A1B0GUT2 108 aa6.77□□□□□ -1.33
TPM3-221ENST00000513769 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
TPM3-221ENST00000513769 J3QQQ9 107 aa6.77□□□□□ -1.33
TPM3-221ENST00000513769 ESRGQ1W209 222 aa6.77□□□□□ -1.33
TPM3-221ENST00000513769 TRAV13-1A0A0B4J241 112 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 IGHV3OR16-9A0A0B4J2B5 98 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
TPM3-221ENST00000513769 CCL18P55774 89 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 CTAG1AP78358 180 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 COX6A2Q02221 97 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 SFTA2Q6UW10 78 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 PCP2Q8IVA1 136 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 LINC00469Q8N7U9 141 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 PRR34Q9NV39 138 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 CDKN2A-AS1Q9UH64 79 aa6.76□□□□□ -1.33
TPM3-221ENST00000513769 A0A087WZ39 114 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 IGLV5-39A0A0G2JS06 123 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 IGHV3-30-3P0DP02 117 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 REG3AQ06141 175 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 MPV17L2Q567V2 206 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 RNASE13Q5GAN3 156 aaKnown RBP6.75□□□□□ -1.33
TPM3-221ENST00000513769 CD164L2Q6UWJ8 174 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 MAPKAPK5-AS1Q8N8E1 139 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
TPM3-221ENST00000513769 ANGP03950 147 aaKnown RBP6.74□□□□□ -1.33
TPM3-221ENST00000513769 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
TPM3-221ENST00000513769 Q6ZVH6 145 aa6.74□□□□□ -1.33
TPM3-221ENST00000513769 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 HERV-K104P63124 156 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 MIAQ16674 131 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 C2orf91Q6ZV80 131 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 UPK3BQ9BT76 320 aa6.73□□□□□ -1.33
TPM3-221ENST00000513769 IGLL5B9A064 214 aa6.72□□□□□ -1.33
TPM3-221ENST00000513769 DNAH10OSP0CZ25 163 aa6.72□□□□□ -1.33
TPM3-221ENST00000513769 HSD52Q0P140 79 aa6.72□□□□□ -1.33
TPM3-221ENST00000513769 CIRBPQ14011 172 aaKnown RBP6.72□□□□□ -1.33
TPM3-221ENST00000513769 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
TPM3-221ENST00000513769 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
TPM3-221ENST00000513769 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
TPM3-221ENST00000513769 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
TPM3-221ENST00000513769 DNAH3Q8TD57 4116 aa6.72□□□□□ -1.33
TPM3-221ENST00000513769 TIMM17BO60830 172 aa6.71□□□□□ -1.34
TPM3-221ENST00000513769 SNHG12Q9BXW3 62 aa6.71□□□□□ -1.34
TPM3-221ENST00000513769 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 TRAV8-3A0A0A6YYJ7 113 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 NDUFA1O15239 70 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 APOMO95445 188 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 SPINK8P0C7L1 97 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 GCSHP23434 173 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
TPM3-221ENST00000513769 COL5A1-AS1Q5SY13 56 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 COPS9Q8WXC6 57 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 NDUFA12Q9UI09 145 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
TPM3-221ENST00000513769 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
TPM3-221ENST00000513769 A6NDN8 102 aa6.69□□□□□ -1.34
TPM3-221ENST00000513769 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
TPM3-221ENST00000513769 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms