RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 SH2D6Q7Z4S9 175 aa9.17□□□□□ -0.94
DEPDC1B-206ENST00000512452 HIST1H4GQ99525 98 aa9.17□□□□□ -0.94
DEPDC1B-206ENST00000512452 GCSHP23434 173 aa9.16□□□□□ -0.94
DEPDC1B-206ENST00000512452 TSPEAR-AS2P59090 65 aa9.16□□□□□ -0.94
DEPDC1B-206ENST00000512452 LINC00469Q8N7U9 141 aa9.16□□□□□ -0.94
DEPDC1B-206ENST00000512452 A0A0J9YY99 117 aa9.15□□□□□ -0.94
DEPDC1B-206ENST00000512452 IGHV3-30-3P0DP02 117 aa9.15□□□□□ -0.94
DEPDC1B-206ENST00000512452 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
DEPDC1B-206ENST00000512452 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.94
DEPDC1B-206ENST00000512452 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 A6NJY4 79 aa9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 SMIM13P0DJ93 91 aa9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 C11orf68Q9H3H3 251 aaKnown RBP9.14□□□□□ -0.95
DEPDC1B-206ENST00000512452 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
DEPDC1B-206ENST00000512452 FXYD2P54710 66 aa9.13□□□□□ -0.95
DEPDC1B-206ENST00000512452 CHCHD5Q9BSY4 110 aa9.13□□□□□ -0.95
DEPDC1B-206ENST00000512452 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 C9orf118A6NHY6 69 aa9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 GAGE6Q13070 117 aa9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 CELA1Q9UNI1 258 aa9.12□□□□□ -0.95
DEPDC1B-206ENST00000512452 TMEM238C9JI98 176 aa9.11□□□□□ -0.95
DEPDC1B-206ENST00000512452 H3BNG1 76 aa9.11□□□□□ -0.95
DEPDC1B-206ENST00000512452 DEFB4AO15263 64 aa9.11□□□□□ -0.95
DEPDC1B-206ENST00000512452 CCL25O15444 150 aa9.11□□□□□ -0.95
DEPDC1B-206ENST00000512452 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-206ENST00000512452 TIMM17BO60830 172 aa9.1□□□□□ -0.95
DEPDC1B-206ENST00000512452 Q6ZVH6 145 aa9.1□□□□□ -0.95
DEPDC1B-206ENST00000512452 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
DEPDC1B-206ENST00000512452 TRAV13-1A0A0B4J241 112 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 A0A0J9YXY3 114 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 F5H768 121 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 NDUFA1O15239 70 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 UBE2V1Q13404 147 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 KIAA1109Q2LD37 5005 aa9.09□□□□□ -0.95
DEPDC1B-206ENST00000512452 TRAV8-3A0A0A6YYJ7 113 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 IGHV3-30P01768 117 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 IGHV3-30-5P0DP03 117 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 COX6A2Q02221 97 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 VAMP3Q15836 100 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 NHP2Q9NX24 153 aaKnown RBP9.08□□□□□ -0.96
DEPDC1B-206ENST00000512452 IGLV4-60A0A075B6I1 120 aa9.07□□□□□ -0.96
DEPDC1B-206ENST00000512452 IGHV3-64A0A075B6Q5 118 aa9.07□□□□□ -0.96
DEPDC1B-206ENST00000512452 SMIM1B2RUZ4 78 aa9.07□□□□□ -0.96
DEPDC1B-206ENST00000512452 LINC01561Q8N1V8 128 aa9.07□□□□□ -0.96
DEPDC1B-206ENST00000512452 SPANXDQ9BXN6 97 aa9.07□□□□□ -0.96
DEPDC1B-206ENST00000512452 SPANXCQ9NY87 97 aa9.07□□□□□ -0.96
DEPDC1B-206ENST00000512452 K7EP13 123 aa9.06□□□□□ -0.96
DEPDC1B-206ENST00000512452 RBX1P62877 108 aa9.06□□□□□ -0.96
DEPDC1B-206ENST00000512452 LELP1Q5T871 98 aa9.06□□□□□ -0.96
DEPDC1B-206ENST00000512452 FRAS1Q86XX4 4008 aa9.05□□□□□ -0.96
DEPDC1B-206ENST00000512452 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
DEPDC1B-206ENST00000512452 HERV-K104P63124 156 aa9.05□□□□□ -0.96
DEPDC1B-206ENST00000512452 RPL24P83731 157 aaKnown RBP9.05□□□□□ -0.96
DEPDC1B-206ENST00000512452 GTF2H5Q6ZYL4 71 aa9.05□□□□□ -0.96
DEPDC1B-206ENST00000512452 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
DEPDC1B-206ENST00000512452 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 TMEM262E9PQX1 116 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 H3BUT2 72 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 IFITM1P13164 125 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 SS18Q15532 418 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
DEPDC1B-206ENST00000512452 A0A087WZ39 114 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 A0A096LPF7 62 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 FABP2P12104 132 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 HTN3P15516 51 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 COPS9Q8WXC6 57 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 RAB37Q96AX2 223 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 LITAFQ99732 161 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 SPATA25Q9BR10 227 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 RETNQ9HD89 108 aa9.03□□□□□ -0.96
DEPDC1B-206ENST00000512452 IGLL5B9A064 214 aa9.02□□□□□ -0.97
DEPDC1B-206ENST00000512452 K7ERJ3 54 aa9.02□□□□□ -0.97
DEPDC1B-206ENST00000512452 MIAQ16674 131 aa9.02□□□□□ -0.97
DEPDC1B-206ENST00000512452 ZNF625Q96I27 306 aaPredicted RBP9.02□□□□□ -0.97
DEPDC1B-206ENST00000512452 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
DEPDC1B-206ENST00000512452 GAGE10A6NGK3 116 aa9.01□□□□□ -0.97
DEPDC1B-206ENST00000512452 K7EP34 96 aa9.01□□□□□ -0.97
DEPDC1B-206ENST00000512452 ABCA13Q86UQ4 5058 aa9.01□□□□□ -0.97
DEPDC1B-206ENST00000512452 TM2D3Q9BRN9 247 aa9□□□□□ -0.97
DEPDC1B-206ENST00000512452 KRTAP4-5Q9BYR2 181 aa9□□□□□ -0.97
DEPDC1B-206ENST00000512452 Q9H8V8 135 aa9□□□□□ -0.97
DEPDC1B-206ENST00000512452 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
DEPDC1B-206ENST00000512452 MUSTN1Q8IVN3 82 aa8.99□□□□□ -0.97
DEPDC1B-206ENST00000512452 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
DEPDC1B-206ENST00000512452 IGKV3OR2-268A0A0C4DH90 116 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms