RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 TRAV13-1A0A0B4J241 112 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 A0A0J9YWU9 116 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 A6NDN8 102 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 TMEM262E9PQX1 116 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 IGHV3-30-3P0DP02 117 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 COX6A2Q02221 97 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 TM2D2Q9BX73 214 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 CDKN2A-AS1Q9UH64 79 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 SACSQ9NZJ4 4579 aa5.57□□□□□ -1.52
COL4A5-208ENST00000505728 A0A1B0GV90 55 aa5.56□□□□□ -1.52
COL4A5-208ENST00000505728 TSPEAR-AS2P59090 65 aa5.56□□□□□ -1.52
COL4A5-208ENST00000505728 RBX1P62877 108 aa5.56□□□□□ -1.52
COL4A5-208ENST00000505728 CEND1Q8N111 149 aa5.56□□□□□ -1.52
COL4A5-208ENST00000505728 C11orf45Q8TAV5 145 aa5.56□□□□□ -1.52
COL4A5-208ENST00000505728 HIST1H4GQ99525 98 aa5.56□□□□□ -1.52
COL4A5-208ENST00000505728 SPANXB1Q9NS25 103 aaPredicted RBP5.56□□□□□ -1.52
COL4A5-208ENST00000505728 RYR2Q92736 4967 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 TRAV8-3A0A0A6YYJ7 113 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 IGLV5-39A0A0G2JS06 123 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 GCSHP23434 173 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 SS18Q15532 418 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 ZFAND6Q6FIF0 208 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 LYPD5Q6UWN5 251 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 Q6ZTC4 211 aa5.55□□□□□ -1.52
COL4A5-208ENST00000505728 IGHV3-64A0A075B6Q5 118 aa5.54□□□□□ -1.52
COL4A5-208ENST00000505728 DEFB131BA0A096LNP1 70 aa5.54□□□□□ -1.52
COL4A5-208ENST00000505728 LINC00959A0A1B0GUT2 108 aa5.54□□□□□ -1.52
COL4A5-208ENST00000505728 SRSF9Q13242 221 aaKnown RBP eCLIP5.54□□□□□ -1.52
COL4A5-208ENST00000505728 LINC01561Q8N1V8 128 aa5.54□□□□□ -1.52
COL4A5-208ENST00000505728 B9D2Q9BPU9 175 aa5.54□□□□□ -1.52
COL4A5-208ENST00000505728 NDUFA12Q9UI09 145 aa5.54□□□□□ -1.52
COL4A5-208ENST00000505728 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 TRAV10A0A0B4J240 114 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 SMIM1B2RUZ4 78 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 TAX1BP3O14907 124 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 NDUFA1O15239 70 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 SMIM13P0DJ93 91 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 PTTG1IPP53801 180 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 FXYD2P54710 66 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 NANOS2P60321 138 aaKnown RBP5.53□□□□□ -1.52
COL4A5-208ENST00000505728 WWC2-AS2Q96NR7 200 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 COX11Q9Y6N1 276 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 TENM2Q9NT68 2774 aa5.53□□□□□ -1.52
COL4A5-208ENST00000505728 A0A087WZ39 114 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 IGKV3OR2-268A0A0C4DH90 116 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 TMEM238LA0A1B0GVL6 79 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 A6NJY4 79 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 TIMM17BO60830 172 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 Q6ZVH6 145 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 C10orf126Q8N4M7 172 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 LYSTQ99698 3801 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
COL4A5-208ENST00000505728 IGHV3-30P01768 117 aa5.51□□□□□ -1.53
COL4A5-208ENST00000505728 ANGP03950 147 aaKnown RBP5.51□□□□□ -1.53
COL4A5-208ENST00000505728 IGHV3-30-5P0DP03 117 aa5.51□□□□□ -1.53
COL4A5-208ENST00000505728 HERV-K104P63124 156 aa5.51□□□□□ -1.53
COL4A5-208ENST00000505728 LINC00269Q8N2A0 174 aa5.51□□□□□ -1.53
COL4A5-208ENST00000505728 C15orf53Q8NAA6 179 aa5.51□□□□□ -1.53
COL4A5-208ENST00000505728 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
COL4A5-208ENST00000505728 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 A0A1B0GWB2 263 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 REG3AQ06141 175 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 CIRBPQ14011 172 aaKnown RBP5.5□□□□□ -1.53
COL4A5-208ENST00000505728 CD164L2Q6UWJ8 174 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 COX7B2Q8TF08 81 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 SPANXCQ9NY87 97 aa5.5□□□□□ -1.53
COL4A5-208ENST00000505728 K7EP13 123 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 IFITM1P13164 125 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
COL4A5-208ENST00000505728 ESRGQ1W209 222 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
COL4A5-208ENST00000505728 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
COL4A5-208ENST00000505728 LITAFQ99732 161 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 Q9H8V8 135 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 PRR34Q9NV39 138 aa5.49□□□□□ -1.53
COL4A5-208ENST00000505728 NHP2Q9NX24 153 aaKnown RBP5.49□□□□□ -1.53
COL4A5-208ENST00000505728 TRAV8-4A0A0B4J246 113 aa5.48□□□□□ -1.53
COL4A5-208ENST00000505728 NHLRC4P0CG21 123 aaPredicted RBP5.48□□□□□ -1.53
COL4A5-208ENST00000505728 XCL1P47992 114 aa5.48□□□□□ -1.53
COL4A5-208ENST00000505728 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
COL4A5-208ENST00000505728 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
COL4A5-208ENST00000505728 KLK12Q9UKR0 248 aa5.48□□□□□ -1.53
COL4A5-208ENST00000505728 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.47□□□□□ -1.53
COL4A5-208ENST00000505728 IGLL5B9A064 214 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 COX7A2LO14548 114 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 VAMP3Q15836 100 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 MIAQ16674 131 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 CLPSL2Q6UWE3 100 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 RAB37Q96AX2 223 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 PPDPFQ9H3Y8 114 aa5.47□□□□□ -1.53
COL4A5-208ENST00000505728 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms