RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 K7ERU9 68 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 PAX4O43316 350 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 IGHV4-30-4P0DP06 118 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 GYPEP15421 78 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 DAD1P61803 113 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 DEFB135Q30KP9 77 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
COL1A1-210ENST00000504289 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
COL1A1-210ENST00000504289 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 LOC100131303A0A0U1RQF7 123 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 K7ERJ3 54 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 MIAQ16674 131 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 KRTAP24-1Q3LI83 254 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 C3orf56Q8N813 242 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 LITAFQ99732 161 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 MDFIQ99750 246 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
COL1A1-210ENST00000504289 STAB1Q9NY15 2570 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 TRAV13-1A0A0B4J241 112 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 F5H768 121 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 CFC1BP0CG36 223 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 CFC1P0CG37 223 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 COX6A2Q02221 97 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 OCIAD2Q56VL3 154 aa6.85□□□□□ -1.31
COL1A1-210ENST00000504289 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 IGHV3-64A0A075B6Q5 118 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 F8W1H4 67 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 H3BNG1 76 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 GAGE6Q13070 117 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 MRPL23Q16540 153 aaKnown RBP6.84□□□□□ -1.31
COL1A1-210ENST00000504289 PRIMA1Q86XR5 153 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 PGPEP1Q9NXJ5 209 aa6.84□□□□□ -1.31
COL1A1-210ENST00000504289 A0A087WZ39 114 aa6.83□□□□□ -1.32
COL1A1-210ENST00000504289 A4D1N5 150 aa6.83□□□□□ -1.32
COL1A1-210ENST00000504289 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
COL1A1-210ENST00000504289 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
COL1A1-210ENST00000504289 APOMO95445 188 aa6.82□□□□□ -1.32
COL1A1-210ENST00000504289 TSPAN13O95857 204 aa6.82□□□□□ -1.32
COL1A1-210ENST00000504289 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
COL1A1-210ENST00000504289 SS18Q15532 418 aa6.82□□□□□ -1.32
COL1A1-210ENST00000504289 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
COL1A1-210ENST00000504289 FBN1P35555 2871 aaKnown RBP6.81□□□□□ -1.32
COL1A1-210ENST00000504289 IGLV4-60A0A075B6I1 120 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 IGHV3-33P01772 117 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 PRSS2P07478 247 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 NAA38Q9BRA0 125 aaKnown RBP6.81□□□□□ -1.32
COL1A1-210ENST00000504289 Q9H8V8 135 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 ERG28Q9UKR5 140 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 ICOSQ9Y6W8 199 aa6.81□□□□□ -1.32
COL1A1-210ENST00000504289 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
COL1A1-210ENST00000504289 ADAMTSL4-AS1Q5T5F5 129 aa6.8□□□□□ -1.32
COL1A1-210ENST00000504289 LELP1Q5T871 98 aa6.8□□□□□ -1.32
COL1A1-210ENST00000504289 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
COL1A1-210ENST00000504289 NBEAL1Q6ZS30 2694 aa6.79□□□□□ -1.32
COL1A1-210ENST00000504289 TRBV30A0A0K0K1B3 111 aa6.79□□□□□ -1.32
COL1A1-210ENST00000504289 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
COL1A1-210ENST00000504289 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
COL1A1-210ENST00000504289 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
COL1A1-210ENST00000504289 M0QXV9 152 aa6.78□□□□□ -1.32
COL1A1-210ENST00000504289 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
COL1A1-210ENST00000504289 CELA1Q9UNI1 258 aa6.78□□□□□ -1.32
COL1A1-210ENST00000504289 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
COL1A1-210ENST00000504289 IBA57-AS1B1ANH7 110 aa6.77□□□□□ -1.33
COL1A1-210ENST00000504289 COX6CP09669 75 aa6.77□□□□□ -1.33
COL1A1-210ENST00000504289 CD164L2Q6UWJ8 174 aa6.77□□□□□ -1.33
COL1A1-210ENST00000504289 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.33
COL1A1-210ENST00000504289 Q8IZM0 81 aa6.77□□□□□ -1.33
COL1A1-210ENST00000504289 G3V4G9 280 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 H3BMG7 143 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 DEFB4AO15263 64 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 CXCL5P42830 114 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 MEIG1Q5JSS6 88 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 MUC7Q8TAX7 377 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 LINC01600Q96MT4 127 aa6.76□□□□□ -1.33
COL1A1-210ENST00000504289 A0A096LPF7 62 aa6.75□□□□□ -1.33
COL1A1-210ENST00000504289 J3QR89 54 aa6.75□□□□□ -1.33
COL1A1-210ENST00000504289 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
COL1A1-210ENST00000504289 SCGB1C2P0DMR2 95 aa6.75□□□□□ -1.33
COL1A1-210ENST00000504289 PSMB2P49721 201 aa6.75□□□□□ -1.33
COL1A1-210ENST00000504289 PRO0461Q9UI25 63 aa6.75□□□□□ -1.33
COL1A1-210ENST00000504289 COX7A2LO14548 114 aa6.74□□□□□ -1.33
COL1A1-210ENST00000504289 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
COL1A1-210ENST00000504289 TRAV13-2A0A0B4J235 113 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 TRAV8-4A0A0B4J246 113 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 REG3AQ06141 175 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 COX17Q14061 63 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 ATXN8Q156A1 80 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 Q1RN00 199 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 TRRAPQ9Y4A5 3859 aa6.73□□□□□ -1.33
COL1A1-210ENST00000504289 IGKV3OR2-268A0A0C4DH90 116 aa6.72□□□□□ -1.33
COL1A1-210ENST00000504289 TCL1BO95988 128 aa6.72□□□□□ -1.33
COL1A1-210ENST00000504289 ANGP03950 147 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms