RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 IGHV3OR16-13A0A075B7E8 117 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 IGHV3OR16-8A0A075B7F1 116 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 IGHV3-74A0A0B4J1X5 117 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 TRBV10-1A0A0K0K1A3 114 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 COX7A2LO14548 114 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 NDUFA1O15239 70 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 TRACP01848 142 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 CD28P10747 220 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 CXCL5P42830 114 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 TSPEAR-AS2P59090 65 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 RPL39P62891 51 aaKnown RBP2.33□□□□□ -2.04
TRIM4-205ENST00000496896 C2orf82Q6UX34 121 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 LINC00643Q86TS7 51 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 MUSTN1Q8IVN3 82 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 DAND5Q8N907 189 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 C15orf53Q8NAA6 179 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 NDUFA12Q9UI09 145 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 BDP1A6H8Y1 2624 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 PRUNE2Q8WUY3 3088 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 CFAP54Q96N23 3096 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 APC2O95996 2303 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 FREM2Q5SZK8 3169 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 VPS13AQ96RL7 3174 aa2.33□□□□□ -2.04
TRIM4-205ENST00000496896 MAP1BP46821 2468 aaKnown RBP2.32□□□□□ -2.04
TRIM4-205ENST00000496896 MUC4Q99102 2169 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 IGHV3-49A0A0A0MS15 119 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 TRAV13-2A0A0B4J235 113 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 TRAV4A0A0B4J268 109 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 TRAV12-3A0A0B4J271 114 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 B4DSR2 109 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 LY6HO94772 140 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 IGHV3-53P01767 116 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 MSMBP08118 114 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 CMC4P56277 68 aaPredicted RBP2.32□□□□□ -2.04
TRIM4-205ENST00000496896 FAM74A4Q5TZK3 123 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 C10orf105Q8TEF2 133 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 UBE2E2Q96LR5 201 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 CNOT1A5YKK6 2376 aaKnown RBP2.32□□□□□ -2.04
TRIM4-205ENST00000496896 CEP250Q9BV73 2442 aa2.32□□□□□ -2.04
TRIM4-205ENST00000496896 ABCA4P78363 2273 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 PCNX1Q96RV3 2341 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 DMDP11532 3685 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 TRAV25A0A0B4J276 109 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 A0A0J9YXV3 536 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 A0A1B0GX51 115 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 H3BUX3 64 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 TRBV12-3P01733 135 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 Q6ZQT7 251 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 DAZ4Q86SG3 579 aaKnown RBP2.31□□□□□ -2.04
TRIM4-205ENST00000496896 NKAPP1Q8N9T2 125 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 PIEZO2Q9H5I5 2752 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 TNRC18O15417 2968 aaPredicted RBP2.31□□□□□ -2.04
TRIM4-205ENST00000496896 FRYLO94915 3013 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 FRYQ5TBA9 3013 aa2.31□□□□□ -2.04
TRIM4-205ENST00000496896 ARHGAP32A7KAX9 2087 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 EP300Q09472 2414 aaPredicted RBP2.3□□□□□ -2.04
TRIM4-205ENST00000496896 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 F6UB75 175 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 H0YGX0 51 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 ATOX1O00244 68 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 UQCRQO14949 82 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 RS1O15537 224 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 IGHV3-11P01762 117 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 PRB4P10163 310 aaPredicted RBP2.3□□□□□ -2.04
TRIM4-205ENST00000496896 EMP1P54849 157 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 ATP5EP2Q5VTU8 51 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 LINC01561Q8N1V8 128 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 MUC7Q8TAX7 377 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 LINC00308Q8TCZ7 52 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 CCL19Q99731 98 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 CHCHD7Q9BUK0 85 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 VPREB3Q9UKI3 123 aa2.3□□□□□ -2.04
TRIM4-205ENST00000496896 PTPRZ1P23471 2315 aaPredicted RBP2.3□□□□□ -2.04
TRIM4-205ENST00000496896 PRRC2CQ9Y520 2896 aaKnown RBP2.3□□□□□ -2.04
TRIM4-205ENST00000496896 ANKRD11Q6UB99 2663 aaPredicted RBP2.29□□□□□ -2.04
TRIM4-205ENST00000496896 H3BQ85 93 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 CRPP02741 224 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
TRIM4-205ENST00000496896 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
TRIM4-205ENST00000496896 SPINK13Q1W4C9 94 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 MEIG1Q5JSS6 88 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 S100A7L2Q5SY68 101 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 BRD3OSQ6XYD6 125 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 Q8N2B8 174 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 TMEM86BQ8N661 226 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 C4orf3Q8WVX3 66 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
TRIM4-205ENST00000496896 NBEAQ8NFP9 2946 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 PTPRQQ9UMZ3 2332 aa2.29□□□□□ -2.04
TRIM4-205ENST00000496896 DSPP15924 2871 aaKnown RBP2.28□□□□□ -2.04
TRIM4-205ENST00000496896 TLN1Q9Y490 2541 aaKnown RBP2.28□□□□□ -2.04
TRIM4-205ENST00000496896 IGKV3-7A0A075B6H7 116 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 TRAV12-2A0A075B6T6 113 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 TRAV8-3A0A0A6YYJ7 113 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 IBA57-AS1B1ANH7 110 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 H7C2G1 150 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 BCE1O60756 84 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms