RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 GVQW2A0A096LPI5 108 aaPredicted RBP0.8□□□□□ -2.28
SSR3-208ENST00000496050 IGLC7A0M8Q6 106 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 F8VRH5 84 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 PRH1P02810 166 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 TMEM170BQ5T4T1 132 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 CACFD1Q9UGQ2 172 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 COL4A6Q14031 1691 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 ABCA3Q99758 1704 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 AKAP12Q02952 1782 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 ARFGEF1Q9Y6D6 1849 aa0.8□□□□□ -2.28
SSR3-208ENST00000496050 PDZD2O15018 2839 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 HMGXB3Q12766 1538 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 MYOM1P52179 1685 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 TOPAZ1Q8N9V7 1692 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 SIPA1L3O60292 1781 aaPredicted RBP0.79□□□□□ -2.28
SSR3-208ENST00000496050 TRAV1-2A0A0B4J238 106 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 UQCR11O14957 56 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 ACYP2P14621 99 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 SMIM11BQ8TCY0 68 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 NXT2Q9NPJ8 142 aaKnown RBP0.79□□□□□ -2.28
SSR3-208ENST00000496050 DOCK2Q92608 1830 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 BSNQ9UPA5 3926 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 EPPK1P58107 5090 aaKnown RBP0.79□□□□□ -2.28
SSR3-208ENST00000496050 TTC28Q96AY4 2481 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 DNHD1Q96M86 4753 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 VCANP13611 3396 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 LAMC3Q9Y6N6 1575 aa0.79□□□□□ -2.28
SSR3-208ENST00000496050 BIRC6Q9NR09 4857 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 CREBBPQ92793 2442 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 ZFYVE26Q68DK2 2539 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 APCP25054 2843 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 TRBV25-1A0A075B6N4 114 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 SYS1-DBNDD2H3BUS1 97 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 BCE1O60756 84 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 APOC3P02656 99 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 Q6ZRX8 168 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 BAGE2Q86Y30 109 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 LCN9Q8WX39 176 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 SPRR4Q96PI1 79 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 SMR3AQ99954 134 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 LINC00472Q9H8W2 130 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 F5P12259 2224 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 MLH3Q9UHC1 1453 aa0.78□□□□□ -2.28
SSR3-208ENST00000496050 CDK13Q14004 1512 aaKnown RBP0.78□□□□□ -2.28
SSR3-208ENST00000496050 DIP2CQ9Y2E4 1556 aa0.78□□□□□ -2.29
SSR3-208ENST00000496050 CHD1O14646 1710 aa0.78□□□□□ -2.29
SSR3-208ENST00000496050 PRDM2Q13029 1718 aa0.78□□□□□ -2.29
SSR3-208ENST00000496050 KIAA1551Q9HCM1 1747 aa0.78□□□□□ -2.29
SSR3-208ENST00000496050 MARF1Q9Y4F3 1742 aaKnown RBP0.78□□□□□ -2.29
SSR3-208ENST00000496050 PSME4Q14997 1843 aa0.78□□□□□ -2.29
SSR3-208ENST00000496050 TANC1Q9C0D5 1861 aa0.78□□□□□ -2.29
SSR3-208ENST00000496050 HERC1Q15751 4861 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 USP9YO00507 2555 aaPredicted RBP0.77□□□□□ -2.29
SSR3-208ENST00000496050 PKD1L1Q8TDX9 2849 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 F2Z2F3 143 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 TRAPPC2P0DI81 140 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 TRAPPC2BP0DI82 140 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 SAA2P0DJI9 122 aaPredicted RBP0.77□□□□□ -2.29
SSR3-208ENST00000496050 FAUP35544 74 aaKnown RBP0.77□□□□□ -2.29
SSR3-208ENST00000496050 SMIM4Q8WVI0 70 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 C20orf78Q9BR46 151 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 SHANK2Q9UPX8 1470 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 TET3O43151 1660 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 MAP1BP46821 2468 aaKnown RBP0.77□□□□□ -2.29
SSR3-208ENST00000496050 CFAP47Q6ZTR5 3102 aa0.77□□□□□ -2.29
SSR3-208ENST00000496050 EYSQ5T1H1 3165 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 AKAP13Q12802 2813 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 FLNAP21333 2647 aaKnown RBP0.76□□□□□ -2.29
SSR3-208ENST00000496050 BAZ1AQ9NRL2 1556 aaPredicted RBP0.76□□□□□ -2.29
SSR3-208ENST00000496050 EHBP1L1Q8N3D4 1523 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 PLEKHH2Q8IVE3 1493 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 A0A0G2JND7 137 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 CTXND1A0A1B0GTU2 59 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 G3V318 75 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 K7EP34 96 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 COX17Q14061 63 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 PRO1933Q9H354 126 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 PROK2Q9HC23 129 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 REV3LO60673 3130 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 NSD1Q96L73 2696 aaPredicted RBP0.76□□□□□ -2.29
SSR3-208ENST00000496050 MYO7AQ13402 2215 aa0.76□□□□□ -2.29
SSR3-208ENST00000496050 UBR5O95071 2799 aaPredicted RBP0.75□□□□□ -2.29
SSR3-208ENST00000496050 SSC5DA1L4H1 1573 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 ARHGEF5Q12774 1597 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 ABCC3O15438 1527 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 EPRSP07814 1512 aaKnown RBP0.75□□□□□ -2.29
SSR3-208ENST00000496050 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 SPG11Q96JI7 2443 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 PLIN4Q96Q06 1357 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 PIN1P1O15428 100 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 MGPP08493 103 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 PMCHL1Q16048 86 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 CFAP126Q5VTH2 177 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 SFTA2Q6UW10 78 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 FAM223AQ8IWN6 122 aa0.75□□□□□ -2.29
SSR3-208ENST00000496050 LINC00846Q9NV44 126 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms