RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TRIAP1O43715 76 aa7.94□□□□□ -1.14
CHMP3-209ENST00000494623 CARD19Q96LW7 228 aa7.94□□□□□ -1.14
CHMP3-209ENST00000494623 IGKV3OR2-268A0A0C4DH90 116 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 IGLV5-39A0A0G2JS06 123 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 SLC25A20O43772 301 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 TEN1Q86WV5 123 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 TIMM17BO60830 172 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 DEFB130BP0DP73 79 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 DEFB130AP0DP74 79 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 GAGE6Q13070 117 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 SS18L2Q9UHA2 77 aa7.93□□□□□ -1.14
CHMP3-209ENST00000494623 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 FHL2Q14192 279 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 SPATA25Q9BR10 227 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 FAM19A3Q7Z5A8 133 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 PPDPFLQ8WWR9 84 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 ICOSQ9Y6W8 199 aa7.92□□□□□ -1.14
CHMP3-209ENST00000494623 LY6G6DO95868 133 aa7.91□□□□□ -1.14
CHMP3-209ENST00000494623 IFITM1P13164 125 aa7.91□□□□□ -1.14
CHMP3-209ENST00000494623 PRIMA1Q86XR5 153 aa7.91□□□□□ -1.14
CHMP3-209ENST00000494623 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
CHMP3-209ENST00000494623 CITED1Q99966 193 aa7.91□□□□□ -1.14
CHMP3-209ENST00000494623 NOTCH2Q04721 2471 aa7.9□□□□□ -1.14
CHMP3-209ENST00000494623 CRLF1O75462 422 aa7.9□□□□□ -1.14
CHMP3-209ENST00000494623 LINC00308Q8TCZ7 52 aa7.9□□□□□ -1.14
CHMP3-209ENST00000494623 FN1P02751 2386 aaKnown RBP7.9□□□□□ -1.14
CHMP3-209ENST00000494623 F5H768 121 aa7.9□□□□□ -1.15
CHMP3-209ENST00000494623 RPL13AP40429 203 aaKnown RBP7.9□□□□□ -1.15
CHMP3-209ENST00000494623 LINC01620Q4KN68 170 aa7.9□□□□□ -1.15
CHMP3-209ENST00000494623 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.15
CHMP3-209ENST00000494623 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
CHMP3-209ENST00000494623 IGLV4-60A0A075B6I1 120 aa7.89□□□□□ -1.15
CHMP3-209ENST00000494623 COX6CP09669 75 aa7.89□□□□□ -1.15
CHMP3-209ENST00000494623 HECTD1Q9ULT8 2610 aa7.89□□□□□ -1.15
CHMP3-209ENST00000494623 TRBV6-8A0A0A6YYG3 113 aa7.88□□□□□ -1.15
CHMP3-209ENST00000494623 RNF183Q96D59 192 aa7.88□□□□□ -1.15
CHMP3-209ENST00000494623 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
CHMP3-209ENST00000494623 CLEC2BQ92478 149 aa7.88□□□□□ -1.15
CHMP3-209ENST00000494623 KMT2BQ9UMN6 2715 aaPredicted RBP7.88□□□□□ -1.15
CHMP3-209ENST00000494623 NBEAL2Q6ZNJ1 2754 aa7.88□□□□□ -1.15
CHMP3-209ENST00000494623 H7C423 109 aa7.87□□□□□ -1.15
CHMP3-209ENST00000494623 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
CHMP3-209ENST00000494623 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
CHMP3-209ENST00000494623 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
CHMP3-209ENST00000494623 NTN5Q8WTR8 489 aaPredicted RBP7.87□□□□□ -1.15
CHMP3-209ENST00000494623 GCN1Q92616 2671 aaKnown RBP7.86□□□□□ -1.15
CHMP3-209ENST00000494623 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
CHMP3-209ENST00000494623 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
CHMP3-209ENST00000494623 GYPEP15421 78 aa7.86□□□□□ -1.15
CHMP3-209ENST00000494623 TMEM262E9PQX1 116 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 KIR2DL5BQ8NHK3 375 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 A0A096LPF7 62 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 COX7B2Q8TF08 81 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 X6R8D5 127 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 VWFP04275 2813 aa7.85□□□□□ -1.15
CHMP3-209ENST00000494623 M0QXV9 152 aa7.84□□□□□ -1.15
CHMP3-209ENST00000494623 DEFB4AO15263 64 aa7.84□□□□□ -1.15
CHMP3-209ENST00000494623 C5orf38Q86SI9 138 aa7.84□□□□□ -1.15
CHMP3-209ENST00000494623 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
CHMP3-209ENST00000494623 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
CHMP3-209ENST00000494623 LST1O00453 97 aa7.83□□□□□ -1.16
CHMP3-209ENST00000494623 MT-ATP8P03928 68 aa7.83□□□□□ -1.16
CHMP3-209ENST00000494623 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
CHMP3-209ENST00000494623 XGP55808 180 aa7.82□□□□□ -1.16
CHMP3-209ENST00000494623 FAM222AQ5U5X8 452 aa7.82□□□□□ -1.16
CHMP3-209ENST00000494623 SMIM20Q8N5G0 67 aa7.82□□□□□ -1.16
CHMP3-209ENST00000494623 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
CHMP3-209ENST00000494623 LINC00612Q8N6U2 182 aa7.82□□□□□ -1.16
CHMP3-209ENST00000494623 MIR7-3HGQ8N6C7 128 aa7.81□□□□□ -1.16
CHMP3-209ENST00000494623 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
CHMP3-209ENST00000494623 LINC00158P58513 81 aa7.81□□□□□ -1.16
CHMP3-209ENST00000494623 DEFB135Q30KP9 77 aa7.81□□□□□ -1.16
CHMP3-209ENST00000494623 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
CHMP3-209ENST00000494623 OTOGQ6ZRI0 2925 aa7.81□□□□□ -1.16
CHMP3-209ENST00000494623 SMIM9A6NGZ8 99 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 CLPSL2Q6UWE3 100 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 UBE2WQ96B02 151 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 A0A087WZ39 114 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 PAX4O43316 350 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 XCL1P47992 114 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 LINC01600Q96MT4 127 aa7.8□□□□□ -1.16
CHMP3-209ENST00000494623 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
CHMP3-209ENST00000494623 PFN2P35080 140 aa7.79□□□□□ -1.16
CHMP3-209ENST00000494623 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
CHMP3-209ENST00000494623 H3BT86 120 aa7.79□□□□□ -1.16
CHMP3-209ENST00000494623 COX7A2LO14548 114 aa7.79□□□□□ -1.16
CHMP3-209ENST00000494623 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
CHMP3-209ENST00000494623 SS18Q15532 418 aa7.78□□□□□ -1.16
CHMP3-209ENST00000494623 C6orf226Q5I0X4 101 aa7.78□□□□□ -1.16
CHMP3-209ENST00000494623 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
CHMP3-209ENST00000494623 TRAV8-4A0A0B4J246 113 aa7.77□□□□□ -1.17
CHMP3-209ENST00000494623 LYRM9A8MSI8 78 aa7.77□□□□□ -1.17
CHMP3-209ENST00000494623 IGHV4-28A0A0C4DH34 117 aa7.76□□□□□ -1.17
CHMP3-209ENST00000494623 A0A1B0GUV1 79 aa7.76□□□□□ -1.17
CHMP3-209ENST00000494623 B5MCH6 92 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms