RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MYO3AQ8NEV4 1616 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 PTPN23Q9H3S7 1636 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TRGV1A0A0A0MS02 117 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TRAV1-2A0A0B4J238 106 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 LINC01549A6NIU2 74 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 INE1O15225 51 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 NDUFB1O75438 58 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 IFI6P09912 130 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 ACYP2P14621 99 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 SPINK7P58062 85 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 GDF5OSQ5U4N7 250 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 C10orf113Q5VZT2 155 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 DEFB132Q7Z7B7 95 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TOMM5Q8N4H5 51 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 C5orf56Q8N8D9 126 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 WFDC9Q8NEX5 89 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TMEM263Q8WUH6 116 aaKnown RBP0.4□□□□□ -2.35
CCDC39-206ENST00000489868 SMIM4Q8WVI0 70 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 LINC00208Q96KT6 92 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 Q96NJ1 140 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 WFDC6Q9BQY6 131 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 LINC00846Q9NV44 126 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 COL24A1Q17RW2 1714 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 PEAK1Q9H792 1746 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 NUP98P52948 1817 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 PSME4Q14997 1843 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 ECM29Q5VYK3 1845 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 NKTRP30414 1462 aaKnown RBP0.4□□□□□ -2.35
CCDC39-206ENST00000489868 ATP7BP35670 1465 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 RALGAPBQ86X10 1494 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 MYH3P11055 1940 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 DENND4CQ5VZ89 1909 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 PLXNC1O60486 1568 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TIAM1Q13009 1591 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 TET3O43151 1660 aa0.4□□□□□ -2.35
CCDC39-206ENST00000489868 KMT2DO14686 5537 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 ANKRD31Q8N7Z5 1873 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 CPS1P31327 1500 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 SYCP2Q9BX26 1530 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 LRRC37A3O60309 1634 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 TARBP1Q13395 1621 aaKnown RBP0.39□□□□□ -2.35
CCDC39-206ENST00000489868 SHROOM2Q13796 1616 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 TNS1Q9HBL0 1735 aaKnown RBP0.39□□□□□ -2.35
CCDC39-206ENST00000489868 VIRMAQ69YN4 1812 aaKnown RBP0.39□□□□□ -2.35
CCDC39-206ENST00000489868 WNK3Q9BYP7 1800 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 ATG2AQ2TAZ0 1938 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 PLXND1Q9Y4D7 1925 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 TRAV21A0A0B4J279 112 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 TRBV30A0A0K0K1B3 111 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 TRBV6-1A0A0K0K1D8 114 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 A0A1B0GU69 56 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 M0R2N4 97 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 PRH1P02810 166 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 HMGA1P17096 107 aaKnown RBP0.39□□□□□ -2.35
CCDC39-206ENST00000489868 FCER1GP30273 86 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 CAV3P56539 151 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 NREPQ16612 68 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 DEFB112Q30KQ8 113 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 NCBP2-AS2Q69YL0 99 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 ENHOQ6UWT2 76 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 Q6ZQY7 126 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 SPRR4Q96PI1 79 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 CCL19Q99731 98 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 PLAC8Q9NZF1 115 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 CD163L1Q9NR16 1453 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 GLI2P10070 1586 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 DIP2AQ14689 1571 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 CDC42BPGQ6DT37 1551 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 KIF21AQ7Z4S6 1674 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 UBR2Q8IWV8 1755 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 SBF1O95248 1867 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 CDK5RAP2Q96SN8 1893 aa0.39□□□□□ -2.35
CCDC39-206ENST00000489868 ANKRD50Q9ULJ7 1429 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 ZMYM4Q5VZL5 1548 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 LRRC7Q96NW7 1537 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 RNF17Q9BXT8 1623 aaKnown RBP0.38□□□□□ -2.35
CCDC39-206ENST00000489868 LRRIQ1Q96JM4 1722 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 KIF13AQ9H1H9 1805 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 MYH10P35580 1976 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 EML5Q05BV3 1969 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 DOCK4Q8N1I0 1966 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 CASZ1Q86V15 1759 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 MYOM1P52179 1685 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 CLTCQ00610 1675 aaKnown RBP0.38□□□□□ -2.35
CCDC39-206ENST00000489868 COL4A6Q14031 1691 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 CEP170BQ9Y4F5 1589 aaPredicted RBP0.38□□□□□ -2.35
CCDC39-206ENST00000489868 K7EMI3 77 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 NDUFA4O00483 81 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 NCR3O14931 201 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 HAMPP81172 84 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 SSBP3-AS1Q7Z2R9 100 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 SMIM11BQ8TCY0 68 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 GAFA1Q96PS6 74 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 NMES1Q9C002 83 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 LINC00472Q9H8W2 130 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 CMC2Q9NRP2 79 aa0.38□□□□□ -2.35
CCDC39-206ENST00000489868 MYH2Q9UKX2 1941 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms