RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 PPDPFQ9H3Y8 114 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 PRSS2P07478 247 aa10.59□□□□□ -0.71
COL9A1-208ENST00000489611 SCGB1C2P0DMR2 95 aa10.59□□□□□ -0.71
COL9A1-208ENST00000489611 CITED1Q99966 193 aa10.59□□□□□ -0.71
COL9A1-208ENST00000489611 HERV-K104P63124 156 aa10.58□□□□□ -0.72
COL9A1-208ENST00000489611 M0QXV9 152 aa10.58□□□□□ -0.72
COL9A1-208ENST00000489611 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
COL9A1-208ENST00000489611 TRBV30A0A0K0K1B3 111 aa10.57□□□□□ -0.72
COL9A1-208ENST00000489611 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 COX6A2Q02221 97 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 ETDBQ3ZM63 59 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 TCL1BO95988 128 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
COL9A1-208ENST00000489611 COX6CP09669 75 aa10.55□□□□□ -0.72
COL9A1-208ENST00000489611 LYRM9A8MSI8 78 aa10.54□□□□□ -0.72
COL9A1-208ENST00000489611 Q1RN00 199 aa10.54□□□□□ -0.72
COL9A1-208ENST00000489611 F5H768 121 aa10.54□□□□□ -0.72
COL9A1-208ENST00000489611 APOC4P55056 127 aa10.54□□□□□ -0.72
COL9A1-208ENST00000489611 Q9H8V8 135 aa10.54□□□□□ -0.72
COL9A1-208ENST00000489611 A8MZ25 164 aa10.53□□□□□ -0.72
COL9A1-208ENST00000489611 ATXN8Q156A1 80 aa10.53□□□□□ -0.72
COL9A1-208ENST00000489611 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
COL9A1-208ENST00000489611 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.72
COL9A1-208ENST00000489611 SH2D6Q7Z4S9 175 aa10.52□□□□□ -0.72
COL9A1-208ENST00000489611 ZNF625Q96I27 306 aaPredicted RBP10.52□□□□□ -0.72
COL9A1-208ENST00000489611 PRO0255Q9UI72 69 aa10.52□□□□□ -0.72
COL9A1-208ENST00000489611 X6R8D5 127 aa10.52□□□□□ -0.72
COL9A1-208ENST00000489611 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
COL9A1-208ENST00000489611 TEN1Q86WV5 123 aa10.52□□□□□ -0.73
COL9A1-208ENST00000489611 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
COL9A1-208ENST00000489611 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
COL9A1-208ENST00000489611 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
COL9A1-208ENST00000489611 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
COL9A1-208ENST00000489611 CHCHD5Q9BSY4 110 aa10.51□□□□□ -0.73
COL9A1-208ENST00000489611 FBN1P35555 2871 aaKnown RBP10.51□□□□□ -0.73
COL9A1-208ENST00000489611 FOXI1Q12951 378 aa10.5□□□□□ -0.73
COL9A1-208ENST00000489611 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
COL9A1-208ENST00000489611 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
COL9A1-208ENST00000489611 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
COL9A1-208ENST00000489611 PPDPFLQ8WWR9 84 aa10.5□□□□□ -0.73
COL9A1-208ENST00000489611 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
COL9A1-208ENST00000489611 ATRQ13535 2644 aa10.5□□□□□ -0.73
COL9A1-208ENST00000489611 H7C2G1 150 aa10.48□□□□□ -0.73
COL9A1-208ENST00000489611 GAGE6Q13070 117 aa10.48□□□□□ -0.73
COL9A1-208ENST00000489611 WIPF1O43516 503 aa10.48□□□□□ -0.73
COL9A1-208ENST00000489611 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
COL9A1-208ENST00000489611 MTURNQ8N3F0 131 aa10.48□□□□□ -0.73
COL9A1-208ENST00000489611 SPATA25Q9BR10 227 aa10.48□□□□□ -0.73
COL9A1-208ENST00000489611 TRIAP1O43715 76 aa10.47□□□□□ -0.73
COL9A1-208ENST00000489611 SLC25A20O43772 301 aa10.47□□□□□ -0.73
COL9A1-208ENST00000489611 GYPEP15421 78 aa10.47□□□□□ -0.73
COL9A1-208ENST00000489611 C3orf56Q8N813 242 aa10.47□□□□□ -0.73
COL9A1-208ENST00000489611 NOTCH3Q9UM47 2321 aa10.47□□□□□ -0.73
COL9A1-208ENST00000489611 IGHV3OR16-9A0A0B4J2B5 98 aa10.46□□□□□ -0.73
COL9A1-208ENST00000489611 WFDC9Q8NEX5 89 aa10.46□□□□□ -0.73
COL9A1-208ENST00000489611 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
COL9A1-208ENST00000489611 A0A087WZ39 114 aa10.46□□□□□ -0.74
COL9A1-208ENST00000489611 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.74
COL9A1-208ENST00000489611 MIFP14174 115 aa10.46□□□□□ -0.74
COL9A1-208ENST00000489611 LINC01561Q8N1V8 128 aa10.46□□□□□ -0.74
COL9A1-208ENST00000489611 C9JAW5 83 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 LINC01620Q4KN68 170 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 FAM222AQ5U5X8 452 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 IGLV4-60A0A075B6I1 120 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 PAX4O43316 350 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 RPL13AP40429 203 aaKnown RBP10.45□□□□□ -0.74
COL9A1-208ENST00000489611 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
COL9A1-208ENST00000489611 SS18Q15532 418 aa10.44□□□□□ -0.74
COL9A1-208ENST00000489611 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
COL9A1-208ENST00000489611 TRRAPQ9Y4A5 3859 aa10.44□□□□□ -0.74
COL9A1-208ENST00000489611 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
COL9A1-208ENST00000489611 NPC2P61916 151 aa10.43□□□□□ -0.74
COL9A1-208ENST00000489611 VWFP04275 2813 aa10.43□□□□□ -0.74
COL9A1-208ENST00000489611 LINC00959A0A1B0GUT2 108 aa10.43□□□□□ -0.74
COL9A1-208ENST00000489611 SCGB1A1P11684 91 aa10.43□□□□□ -0.74
COL9A1-208ENST00000489611 DAND5Q8N907 189 aa10.43□□□□□ -0.74
COL9A1-208ENST00000489611 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
COL9A1-208ENST00000489611 H3BT86 120 aa10.42□□□□□ -0.74
COL9A1-208ENST00000489611 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
COL9A1-208ENST00000489611 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
COL9A1-208ENST00000489611 LST1O00453 97 aa10.41□□□□□ -0.74
COL9A1-208ENST00000489611 DAD1P61803 113 aa10.41□□□□□ -0.74
COL9A1-208ENST00000489611 DEFB135Q30KP9 77 aa10.41□□□□□ -0.74
COL9A1-208ENST00000489611 TRAV13-2A0A0B4J235 113 aa10.4□□□□□ -0.74
COL9A1-208ENST00000489611 ATP5G1P05496 136 aa10.4□□□□□ -0.74
COL9A1-208ENST00000489611 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
COL9A1-208ENST00000489611 SPART-AS1P0CW21 52 aa10.39□□□□□ -0.75
COL9A1-208ENST00000489611 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
COL9A1-208ENST00000489611 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
COL9A1-208ENST00000489611 Q8NAQ8 132 aa10.38□□□□□ -0.75
COL9A1-208ENST00000489611 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
COL9A1-208ENST00000489611 TOMM7Q9P0U1 55 aa10.38□□□□□ -0.75
COL9A1-208ENST00000489611 COX7A2LO14548 114 aa10.37□□□□□ -0.75
COL9A1-208ENST00000489611 Q8IZM0 81 aa10.37□□□□□ -0.75
COL9A1-208ENST00000489611 MRPL23Q16540 153 aaKnown RBP10.37□□□□□ -0.75
COL9A1-208ENST00000489611 A0A0U1RRA0 63 aa10.36□□□□□ -0.75
COL9A1-208ENST00000489611 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms