RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NANOS2P60321 138 aaKnown RBP4.89□□□□□ -1.63
SF3A3-206ENST00000487062 LELP1Q5T871 98 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 PCP2Q8IVA1 136 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 ANK2Q01484 3957 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 TRAV13-1A0A0B4J241 112 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
SF3A3-206ENST00000487062 BATFQ16520 125 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 KRTAP21-3Q3LHN1 58 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
SF3A3-206ENST00000487062 IGLV4-60A0A075B6I1 120 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 J3QQQ9 107 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 CCL25O15444 150 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 RBX1P62877 108 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 LINC00242Q5T6M2 205 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 C2orf91Q6ZV80 131 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 C15orf53Q8NAA6 179 aa4.87□□□□□ -1.63
SF3A3-206ENST00000487062 IGHV1-58A0A0C4DH39 117 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 IGKV3OR2-268A0A0C4DH90 116 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 K7EP13 123 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 HINT1P49773 126 aaPredicted RBP4.86□□□□□ -1.63
SF3A3-206ENST00000487062 HSD52Q0P140 79 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 UBE2V1Q13404 147 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 SS18Q15532 418 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 MPV17L2Q567V2 206 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 LYPD5Q6UWN5 251 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 SCGB1D4Q6XE38 83 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 MAPKAPK5-AS1Q8N8E1 139 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 TTTY13Q9BZ97 58 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 TP73-AS1Q9UF72 201 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 COX11Q9Y6N1 276 aa4.86□□□□□ -1.63
SF3A3-206ENST00000487062 IGHV3-64A0A075B6Q5 118 aa4.85□□□□□ -1.63
SF3A3-206ENST00000487062 LINC00959A0A1B0GUT2 108 aa4.85□□□□□ -1.63
SF3A3-206ENST00000487062 ANGP03950 147 aaKnown RBP4.85□□□□□ -1.63
SF3A3-206ENST00000487062 SPINK8P0C7L1 97 aa4.85□□□□□ -1.63
SF3A3-206ENST00000487062 NHLRC4P0CG21 123 aaPredicted RBP4.85□□□□□ -1.63
SF3A3-206ENST00000487062 IGHV3-30-3P0DP02 117 aa4.85□□□□□ -1.63
SF3A3-206ENST00000487062 COX6A2Q02221 97 aa4.85□□□□□ -1.63
SF3A3-206ENST00000487062 TAL2Q16559 108 aa4.85□□□□□ -1.63
SF3A3-206ENST00000487062 TRAV8-3A0A0A6YYJ7 113 aa4.84□□□□□ -1.63
SF3A3-206ENST00000487062 C9orf118A6NHY6 69 aa4.84□□□□□ -1.63
SF3A3-206ENST00000487062 BVES-AS1Q5T3Y7 98 aa4.84□□□□□ -1.63
SF3A3-206ENST00000487062 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
SF3A3-206ENST00000487062 HIST1H4GQ99525 98 aa4.84□□□□□ -1.63
SF3A3-206ENST00000487062 NOTCH1P46531 2555 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 A6NDN8 102 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 SMIM1B2RUZ4 78 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 PCP4P48539 62 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 TSPEAR-AS2P59090 65 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 REG3AQ06141 175 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 SRSF9Q13242 221 aaKnown RBP eCLIP4.83□□□□□ -1.64
SF3A3-206ENST00000487062 LINC01561Q8N1V8 128 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 LINC00269Q8N2A0 174 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 NDUFA12Q9UI09 145 aa4.83□□□□□ -1.64
SF3A3-206ENST00000487062 NBEAL1Q6ZS30 2694 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 A0A087WZ39 114 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 IGHV3OR16-9A0A0B4J2B5 98 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 TMEM238C9JI98 176 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 NDUFA1O15239 70 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 CRPP02741 224 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 ESRGQ1W209 222 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 ZFAND6Q6FIF0 208 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 CLPSL2Q6UWE3 100 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 CEND1Q8N111 149 aa4.82□□□□□ -1.64
SF3A3-206ENST00000487062 SPANXB1Q9NS25 103 aaPredicted RBP4.82□□□□□ -1.64
SF3A3-206ENST00000487062 TRAV8-4A0A0B4J246 113 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 IGLL5B9A064 214 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 IGHV3-30P01768 117 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 IGHV3-33P01772 117 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 IGHV3-30-5P0DP03 117 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 XCL1P47992 114 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 CCL18P55774 89 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 HERV-K104P63124 156 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 CIRBPQ14011 172 aaKnown RBP4.81□□□□□ -1.64
SF3A3-206ENST00000487062 VAMP3Q15836 100 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 CD164L2Q6UWJ8 174 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 WFDC10BQ8IUB3 73 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 COX7B2Q8TF08 81 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 KLK12Q9UKR0 248 aa4.81□□□□□ -1.64
SF3A3-206ENST00000487062 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 COX7A2LO14548 114 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 TIMM17BO60830 172 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 SFTA2Q6UW10 78 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 Q6ZVH6 145 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 C5orf38Q86SI9 138 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 CHCHD10Q8WYQ3 142 aaPredicted RBP4.8□□□□□ -1.64
SF3A3-206ENST00000487062 PRR34Q9NV39 138 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 TENM3Q9P273 2699 aa4.8□□□□□ -1.64
SF3A3-206ENST00000487062 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms