RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 H3BNG1 76 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 K7ERJ3 54 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 KRTAP10-11P60412 298 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 COX6A2Q02221 97 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 PRIMA1Q86XR5 153 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 IGHV3-64A0A075B6Q5 118 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 A0A0B4J2C4 111 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 IFITM1P13164 125 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 HERV-K104P63124 156 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 GAGE6Q13070 117 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
PKP4-213ENST00000486254 SFTA2Q6UW10 78 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 RAB37Q96AX2 223 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 CELA1Q9UNI1 258 aa8.32□□□□□ -1.08
PKP4-213ENST00000486254 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
PKP4-213ENST00000486254 SPCS1Q9Y6A9 102 aa8.31□□□□□ -1.08
PKP4-213ENST00000486254 IGLV4-60A0A075B6I1 120 aa8.31□□□□□ -1.08
PKP4-213ENST00000486254 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
PKP4-213ENST00000486254 MIAQ16674 131 aa8.31□□□□□ -1.08
PKP4-213ENST00000486254 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
PKP4-213ENST00000486254 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
PKP4-213ENST00000486254 TRRAPQ9Y4A5 3859 aa8.3□□□□□ -1.08
PKP4-213ENST00000486254 ZNF625Q96I27 306 aaPredicted RBP8.3□□□□□ -1.08
PKP4-213ENST00000486254 STAB1Q9NY15 2570 aa8.29□□□□□ -1.08
PKP4-213ENST00000486254 A0A087WZ39 114 aa8.29□□□□□ -1.08
PKP4-213ENST00000486254 RBX1P62877 108 aa8.29□□□□□ -1.08
PKP4-213ENST00000486254 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
PKP4-213ENST00000486254 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
PKP4-213ENST00000486254 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
PKP4-213ENST00000486254 CFC1P0CG37 223 aa8.28□□□□□ -1.08
PKP4-213ENST00000486254 MAST4O15021 2626 aa8.28□□□□□ -1.08
PKP4-213ENST00000486254 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 A4D1N5 150 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 DEFB4AO15263 64 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 LELP1Q5T871 98 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 Q9H8V8 135 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 NBEAL2Q6ZNJ1 2754 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
PKP4-213ENST00000486254 TSPAN13O95857 204 aa8.26□□□□□ -1.09
PKP4-213ENST00000486254 SS18Q15532 418 aa8.26□□□□□ -1.09
PKP4-213ENST00000486254 NAA38Q9BRA0 125 aaKnown RBP8.26□□□□□ -1.09
PKP4-213ENST00000486254 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
PKP4-213ENST00000486254 A0A096LPF7 62 aa8.24□□□□□ -1.09
PKP4-213ENST00000486254 APOMO95445 188 aa8.24□□□□□ -1.09
PKP4-213ENST00000486254 COX7B2Q8TF08 81 aa8.24□□□□□ -1.09
PKP4-213ENST00000486254 FBN1P35555 2871 aaKnown RBP8.24□□□□□ -1.09
PKP4-213ENST00000486254 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
PKP4-213ENST00000486254 CYSRT1A8MQ03 144 aa8.23□□□□□ -1.09
PKP4-213ENST00000486254 TMEM262E9PQX1 116 aa8.23□□□□□ -1.09
PKP4-213ENST00000486254 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
PKP4-213ENST00000486254 F8W1H4 67 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 KPRPQ5T749 579 aaPredicted RBP8.22□□□□□ -1.09
PKP4-213ENST00000486254 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 G3V4G9 280 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
PKP4-213ENST00000486254 PRSS2P07478 247 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 Q8IZM0 81 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
PKP4-213ENST00000486254 COL6A5A8TX70 2615 aa8.21□□□□□ -1.09
PKP4-213ENST00000486254 IBA57-AS1B1ANH7 110 aa8.21□□□□□ -1.1
PKP4-213ENST00000486254 CXCL5P42830 114 aa8.21□□□□□ -1.1
PKP4-213ENST00000486254 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
PKP4-213ENST00000486254 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
PKP4-213ENST00000486254 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
PKP4-213ENST00000486254 REG3AQ06141 175 aa8.2□□□□□ -1.1
PKP4-213ENST00000486254 HTN3P15516 51 aa8.19□□□□□ -1.1
PKP4-213ENST00000486254 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
PKP4-213ENST00000486254 SPATA25Q9BR10 227 aa8.19□□□□□ -1.1
PKP4-213ENST00000486254 RETNQ9HD89 108 aa8.19□□□□□ -1.1
PKP4-213ENST00000486254 IGKV3OR2-268A0A0C4DH90 116 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 LYPD5Q6UWN5 251 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 TM2D3Q9BRN9 247 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 CMYA5Q8N3K9 4069 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 COX7A2LO14548 114 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 ANGP03950 147 aaKnown RBP8.18□□□□□ -1.1
PKP4-213ENST00000486254 MUC7Q8TAX7 377 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 PRO0461Q9UI25 63 aa8.18□□□□□ -1.1
PKP4-213ENST00000486254 TRAV8-4A0A0B4J246 113 aa8.17□□□□□ -1.1
PKP4-213ENST00000486254 M0QXV9 152 aa8.17□□□□□ -1.1
PKP4-213ENST00000486254 XCL1P47992 114 aa8.17□□□□□ -1.1
PKP4-213ENST00000486254 OCIAD2Q56VL3 154 aa8.17□□□□□ -1.1
PKP4-213ENST00000486254 Q6ZTC4 211 aa8.17□□□□□ -1.1
PKP4-213ENST00000486254 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
PKP4-213ENST00000486254 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
PKP4-213ENST00000486254 LOC107984156A0A0G2JMH3 177 aa8.16□□□□□ -1.1
PKP4-213ENST00000486254 H3BMG7 143 aa8.16□□□□□ -1.1
PKP4-213ENST00000486254 K7ERU9 68 aa8.16□□□□□ -1.1
PKP4-213ENST00000486254 ARL17AQ8IVW1 177 aa8.16□□□□□ -1.1
PKP4-213ENST00000486254 C11orf45Q8TAV5 145 aa8.16□□□□□ -1.1
PKP4-213ENST00000486254 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
PKP4-213ENST00000486254 A0A0J9YWU9 116 aa8.15□□□□□ -1.1
PKP4-213ENST00000486254 COX17Q14061 63 aa8.15□□□□□ -1.1
PKP4-213ENST00000486254 SOSTDC1Q6X4U4 206 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms