RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 PLEKHB2Q96CS7 222 aa3.77□□□□□ -1.81
COL17A1-206ENST00000483876 CHAC1Q9BUX1 264 aa3.77□□□□□ -1.81
COL17A1-206ENST00000483876 TM2D2Q9BX73 214 aa3.77□□□□□ -1.81
COL17A1-206ENST00000483876 TRAV8-6A0A0B4J262 113 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 IGHV1-58A0A0C4DH39 117 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 H3BRM9 83 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 J3QL48 77 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 J3QQQ9 107 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 EREGO14944 169 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 ZNF22P17026 224 aaPredicted RBP3.76□□□□□ -1.81
COL17A1-206ENST00000483876 LINC00242Q5T6M2 205 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 CEMP1Q6PRD7 247 aaPredicted RBP3.76□□□□□ -1.81
COL17A1-206ENST00000483876 VSIG2Q96IQ7 327 aa3.76□□□□□ -1.81
COL17A1-206ENST00000483876 GEMIN7Q9H840 131 aaKnown RBP3.76□□□□□ -1.81
COL17A1-206ENST00000483876 LOC100131303A0A0U1RQF7 123 aa3.75□□□□□ -1.81
COL17A1-206ENST00000483876 A6NDN8 102 aa3.75□□□□□ -1.81
COL17A1-206ENST00000483876 F5H768 121 aa3.75□□□□□ -1.81
COL17A1-206ENST00000483876 HINT1P49773 126 aaPredicted RBP3.75□□□□□ -1.81
COL17A1-206ENST00000483876 C12orf74Q32Q52 190 aa3.75□□□□□ -1.81
COL17A1-206ENST00000483876 ORAOV1Q8WV07 137 aa3.75□□□□□ -1.81
COL17A1-206ENST00000483876 IGLV5-39A0A0G2JS06 123 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 A0A0J9YY99 117 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 ZNF815PA8K554 130 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 DEFB4AO15263 64 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 IGHV3-30-3P0DP02 117 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
COL17A1-206ENST00000483876 LELP1Q5T871 98 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 Q6ZUT4 128 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 Q6ZVH6 145 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 LINC01561Q8N1V8 128 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 SPATA25Q9BR10 227 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 TM2D3Q9BRN9 247 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 CHCHD5Q9BSY4 110 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 SPANXB1Q9NS25 103 aaPredicted RBP3.74□□□□□ -1.81
COL17A1-206ENST00000483876 TP73-AS1Q9UF72 201 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 CELA1Q9UNI1 258 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
COL17A1-206ENST00000483876 KMT2AQ03164 3969 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 A0A1B0GVY2 172 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 TIMM17BO60830 172 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 RBX1P62877 108 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 BATFQ16520 125 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 SCGB1D4Q6XE38 83 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 CEND1Q8N111 149 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 Q8N1X5 172 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 LINC00469Q8N7U9 141 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
COL17A1-206ENST00000483876 IGLV4-60A0A075B6I1 120 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 A0A087WZ39 114 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 A0A096LPF7 62 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 TRAV13-1A0A0B4J241 112 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 A0A0J9YXY3 114 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 A0A1B0GV90 55 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 A0A1B0GWB2 263 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 TMEM262E9PQX1 116 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 PTTG1IPP53801 180 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 TCTAP57738 103 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 COX6A2Q02221 97 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 GAGE6Q13070 117 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 SRSF9Q13242 221 aaKnown RBP eCLIP3.72□□□□□ -1.81
COL17A1-206ENST00000483876 SS18Q15532 418 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
COL17A1-206ENST00000483876 SFTA2Q6UW10 78 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 LYPD5Q6UWN5 251 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 C11orf45Q8TAV5 145 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 PPDPFQ9H3Y8 114 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 NDUFA12Q9UI09 145 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 COX11Q9Y6N1 276 aa3.72□□□□□ -1.81
COL17A1-206ENST00000483876 PKHD1P08F94 4074 aa3.71□□□□□ -1.81
COL17A1-206ENST00000483876 TMEM238LA0A1B0GVL6 79 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 A6NJY4 79 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 TMEM238C9JI98 176 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 TAX1BP3O14907 124 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 NDUFA1O15239 70 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 IFITM1P13164 125 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 TSPEAR-AS2P59090 65 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 HERV-K104P63124 156 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
COL17A1-206ENST00000483876 C4orf48Q5BLP8 95 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 COPS9Q8WXC6 57 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 HSPG2P98160 4391 aa3.71□□□□□ -1.82
COL17A1-206ENST00000483876 TRAV8-3A0A0A6YYJ7 113 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 TRAV10A0A0B4J240 114 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 A0A0J9YWU9 116 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 C9orf118A6NHY6 69 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 SMIM1B2RUZ4 78 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 IGHV3-30P01768 117 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 SPINK8P0C7L1 97 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 IGHV3-30-5P0DP03 117 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 HTN3P15516 51 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 GCSHP23434 173 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 RPL24P83731 157 aaKnown RBP3.7□□□□□ -1.82
COL17A1-206ENST00000483876 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 Q6ZTC4 211 aa3.7□□□□□ -1.82
COL17A1-206ENST00000483876 LINC00336Q6ZUF6 198 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms