RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TIMM17BO60830 172 aa12□□□□□ -0.49
MRPL28-210ENST00000483764 UBE2D3P61077 147 aa12□□□□□ -0.49
MRPL28-210ENST00000483764 UBE2D2P62837 147 aa12□□□□□ -0.49
MRPL28-210ENST00000483764 HERVK_113P63121 156 aa12□□□□□ -0.49
MRPL28-210ENST00000483764 FAM104AQ969W3 186 aa12□□□□□ -0.49
MRPL28-210ENST00000483764 LOC100131303A0A0U1RQF7 123 aa11.99□□□□□ -0.49
MRPL28-210ENST00000483764 GAGE12JA6NER3 117 aa11.99□□□□□ -0.49
MRPL28-210ENST00000483764 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
MRPL28-210ENST00000483764 GAGE4Q13068 117 aa11.99□□□□□ -0.49
MRPL28-210ENST00000483764 GAGE5Q13069 117 aa11.99□□□□□ -0.49
MRPL28-210ENST00000483764 GAGE13Q4V321 117 aa11.99□□□□□ -0.49
MRPL28-210ENST00000483764 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
MRPL28-210ENST00000483764 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
MRPL28-210ENST00000483764 COL7A1Q02388 2944 aa11.98□□□□□ -0.49
MRPL28-210ENST00000483764 TRBV20-1A0A075B6N2 111 aa11.97□□□□□ -0.49
MRPL28-210ENST00000483764 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
MRPL28-210ENST00000483764 A0A0B4J2C4 111 aa11.97□□□□□ -0.49
MRPL28-210ENST00000483764 GYPEP15421 78 aa11.97□□□□□ -0.49
MRPL28-210ENST00000483764 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
MRPL28-210ENST00000483764 NAA38Q9BRA0 125 aaKnown RBP11.97□□□□□ -0.49
MRPL28-210ENST00000483764 PGPEP1Q9NXJ5 209 aa11.97□□□□□ -0.49
MRPL28-210ENST00000483764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
MRPL28-210ENST00000483764 A0A0J9YXY3 114 aa11.96□□□□□ -0.49
MRPL28-210ENST00000483764 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
MRPL28-210ENST00000483764 RBX1P62877 108 aa11.96□□□□□ -0.49
MRPL28-210ENST00000483764 Q6ZUT4 128 aa11.96□□□□□ -0.49
MRPL28-210ENST00000483764 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
MRPL28-210ENST00000483764 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
MRPL28-210ENST00000483764 PRKDCP78527 4128 aaKnown RBP11.96□□□□□ -0.49
MRPL28-210ENST00000483764 DEFB131BA0A096LNP1 70 aa11.96□□□□□ -0.5
MRPL28-210ENST00000483764 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.5
MRPL28-210ENST00000483764 C10orf126Q8N4M7 172 aa11.96□□□□□ -0.5
MRPL28-210ENST00000483764 PRO1854Q9UHT4 67 aa11.96□□□□□ -0.5
MRPL28-210ENST00000483764 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
MRPL28-210ENST00000483764 J3QR89 54 aa11.95□□□□□ -0.5
MRPL28-210ENST00000483764 IFITM1P13164 125 aa11.95□□□□□ -0.5
MRPL28-210ENST00000483764 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
MRPL28-210ENST00000483764 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
MRPL28-210ENST00000483764 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
MRPL28-210ENST00000483764 NDUFA12Q9UI09 145 aa11.94□□□□□ -0.5
MRPL28-210ENST00000483764 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
MRPL28-210ENST00000483764 PPDPFQ9H3Y8 114 aa11.93□□□□□ -0.5
MRPL28-210ENST00000483764 UBE2L6O14933 153 aa11.92□□□□□ -0.5
MRPL28-210ENST00000483764 CFC1BP0CG36 223 aa11.92□□□□□ -0.5
MRPL28-210ENST00000483764 CFC1P0CG37 223 aa11.92□□□□□ -0.5
MRPL28-210ENST00000483764 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
MRPL28-210ENST00000483764 STAB2Q8WWQ8 2551 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 H3BNG1 76 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 NDUFA1O15239 70 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 TSPAN13O95857 204 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 CEMP1Q6PRD7 247 aaPredicted RBP11.91□□□□□ -0.5
MRPL28-210ENST00000483764 ATP6V0E2Q8NHE4 81 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 APOMO95445 188 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
MRPL28-210ENST00000483764 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
MRPL28-210ENST00000483764 CDC42SE2Q9NRR3 84 aa11.9□□□□□ -0.5
MRPL28-210ENST00000483764 MIAQ16674 131 aa11.89□□□□□ -0.51
MRPL28-210ENST00000483764 A0A096LPF7 62 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 A4D1N5 150 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 HERV-K104P63124 156 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 SH2D6Q7Z4S9 175 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 MUSTN1Q8IVN3 82 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 VPS25Q9BRG1 176 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
MRPL28-210ENST00000483764 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
MRPL28-210ENST00000483764 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
MRPL28-210ENST00000483764 LITAFQ99732 161 aa11.87□□□□□ -0.51
MRPL28-210ENST00000483764 CDKN2A-AS1Q9UH64 79 aa11.87□□□□□ -0.51
MRPL28-210ENST00000483764 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 H3BMG7 143 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 M0QXV9 152 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 SPINK8P0C7L1 97 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
MRPL28-210ENST00000483764 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
MRPL28-210ENST00000483764 TRBV6-8A0A0A6YYG3 113 aa11.85□□□□□ -0.51
MRPL28-210ENST00000483764 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
MRPL28-210ENST00000483764 PRO0461Q9UI25 63 aa11.85□□□□□ -0.51
MRPL28-210ENST00000483764 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
MRPL28-210ENST00000483764 SCGB1C2P0DMR2 95 aa11.82□□□□□ -0.52
MRPL28-210ENST00000483764 C15orf53Q8NAA6 179 aa11.82□□□□□ -0.52
MRPL28-210ENST00000483764 SMIM1B2RUZ4 78 aa11.81□□□□□ -0.52
MRPL28-210ENST00000483764 PRSS2P07478 247 aa11.81□□□□□ -0.52
MRPL28-210ENST00000483764 PSMB2P49721 201 aa11.81□□□□□ -0.52
MRPL28-210ENST00000483764 COX6CP09669 75 aa11.81□□□□□ -0.52
MRPL28-210ENST00000483764 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
MRPL28-210ENST00000483764 WFDC2Q14508 124 aa11.8□□□□□ -0.52
MRPL28-210ENST00000483764 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
MRPL28-210ENST00000483764 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
MRPL28-210ENST00000483764 COX6A2Q02221 97 aa11.79□□□□□ -0.52
MRPL28-210ENST00000483764 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
MRPL28-210ENST00000483764 A0A1B0GUV1 79 aa11.78□□□□□ -0.52
MRPL28-210ENST00000483764 ATXN8Q156A1 80 aa11.78□□□□□ -0.52
MRPL28-210ENST00000483764 LELP1Q5T871 98 aa11.78□□□□□ -0.52
MRPL28-210ENST00000483764 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
MRPL28-210ENST00000483764 Q1RN00 199 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms