RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 A6NDN8 102 aa7.58□□□□□ -1.2
VTI1A-204ENST00000480057 NANOS2P60321 138 aaKnown RBP7.58□□□□□ -1.2
VTI1A-204ENST00000480057 SS18Q15532 418 aa7.58□□□□□ -1.2
VTI1A-204ENST00000480057 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
VTI1A-204ENST00000480057 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
VTI1A-204ENST00000480057 TRAV8-3A0A0A6YYJ7 113 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 LINC00959A0A1B0GUT2 108 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-204ENST00000480057 CEND1Q8N111 149 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 MRAPQ8TCY5 172 aa7.57□□□□□ -1.2
VTI1A-204ENST00000480057 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
VTI1A-204ENST00000480057 A0A087WZ39 114 aa7.56□□□□□ -1.2
VTI1A-204ENST00000480057 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
VTI1A-204ENST00000480057 NDUFA1O15239 70 aa7.56□□□□□ -1.2
VTI1A-204ENST00000480057 TIMM17BO60830 172 aa7.56□□□□□ -1.2
VTI1A-204ENST00000480057 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
VTI1A-204ENST00000480057 TMEM238C9JI98 176 aa7.55□□□□□ -1.2
VTI1A-204ENST00000480057 GCSHP23434 173 aa7.55□□□□□ -1.2
VTI1A-204ENST00000480057 Q6ZVH6 145 aa7.55□□□□□ -1.2
VTI1A-204ENST00000480057 NDUFA12Q9UI09 145 aa7.55□□□□□ -1.2
VTI1A-204ENST00000480057 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
VTI1A-204ENST00000480057 NHLRC4P0CG21 123 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-204ENST00000480057 HERV-K104P63124 156 aa7.54□□□□□ -1.2
VTI1A-204ENST00000480057 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
VTI1A-204ENST00000480057 C10orf126Q8N4M7 172 aa7.54□□□□□ -1.2
VTI1A-204ENST00000480057 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
VTI1A-204ENST00000480057 A0A1B0GV90 55 aa7.53□□□□□ -1.2
VTI1A-204ENST00000480057 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
VTI1A-204ENST00000480057 A6NJY4 79 aa7.53□□□□□ -1.2
VTI1A-204ENST00000480057 ANGP03950 147 aaKnown RBP7.53□□□□□ -1.2
VTI1A-204ENST00000480057 REG3AQ06141 175 aa7.53□□□□□ -1.2
VTI1A-204ENST00000480057 SRSF9Q13242 221 aaKnown RBP eCLIP7.53□□□□□ -1.2
VTI1A-204ENST00000480057 CD164L2Q6UWJ8 174 aa7.53□□□□□ -1.2
VTI1A-204ENST00000480057 LINC00269Q8N2A0 174 aa7.53□□□□□ -1.2
VTI1A-204ENST00000480057 NOTCH1P46531 2555 aa7.52□□□□□ -1.21
VTI1A-204ENST00000480057 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
VTI1A-204ENST00000480057 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
VTI1A-204ENST00000480057 FXYD2P54710 66 aa7.52□□□□□ -1.21
VTI1A-204ENST00000480057 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
VTI1A-204ENST00000480057 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
VTI1A-204ENST00000480057 MGAM2Q2M2H8 2515 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 A0A1B0GWB2 263 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 TAX1BP3O14907 124 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
VTI1A-204ENST00000480057 ESRGQ1W209 222 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 COX7B2Q8TF08 81 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-204ENST00000480057 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
VTI1A-204ENST00000480057 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
VTI1A-204ENST00000480057 LINC01556Q5JQF7 62 aa7.5□□□□□ -1.21
VTI1A-204ENST00000480057 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-204ENST00000480057 LITAFQ99732 161 aa7.5□□□□□ -1.21
VTI1A-204ENST00000480057 HUWE1Q7Z6Z7 4374 aaKnown RBP7.5□□□□□ -1.21
VTI1A-204ENST00000480057 COX7A2LO14548 114 aa7.49□□□□□ -1.21
VTI1A-204ENST00000480057 IFITM1P13164 125 aa7.49□□□□□ -1.21
VTI1A-204ENST00000480057 XCL1P47992 114 aa7.49□□□□□ -1.21
VTI1A-204ENST00000480057 MIAQ16674 131 aa7.49□□□□□ -1.21
VTI1A-204ENST00000480057 COPS9Q8WXC6 57 aa7.49□□□□□ -1.21
VTI1A-204ENST00000480057 Q9H8V8 135 aa7.49□□□□□ -1.21
VTI1A-204ENST00000480057 CRPP02741 224 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 DNAH10OSP0CZ25 163 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 CXCL5P42830 114 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
VTI1A-204ENST00000480057 CLPSL2Q6UWE3 100 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 Q8IZM0 81 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 KLK12Q9UKR0 248 aa7.48□□□□□ -1.21
VTI1A-204ENST00000480057 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
VTI1A-204ENST00000480057 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
VTI1A-204ENST00000480057 APOMO95445 188 aa7.47□□□□□ -1.21
VTI1A-204ENST00000480057 FOXI1Q12951 378 aa7.47□□□□□ -1.21
VTI1A-204ENST00000480057 ENHOQ6UWT2 76 aa7.47□□□□□ -1.21
VTI1A-204ENST00000480057 Q8N3U1 123 aa7.47□□□□□ -1.21
VTI1A-204ENST00000480057 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
VTI1A-204ENST00000480057 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-204ENST00000480057 K7EP13 123 aa7.46□□□□□ -1.22
VTI1A-204ENST00000480057 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
VTI1A-204ENST00000480057 PRSS2P07478 247 aa7.46□□□□□ -1.22
VTI1A-204ENST00000480057 CCL18P55774 89 aa7.46□□□□□ -1.22
VTI1A-204ENST00000480057 UPK3BQ9BT76 320 aa7.46□□□□□ -1.22
VTI1A-204ENST00000480057 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-204ENST00000480057 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
VTI1A-204ENST00000480057 IBA57-AS1B1ANH7 110 aa7.45□□□□□ -1.22
VTI1A-204ENST00000480057 MALP21145 153 aa7.45□□□□□ -1.22
VTI1A-204ENST00000480057 ADAMTSL4-AS1Q5T5F5 129 aa7.45□□□□□ -1.22
VTI1A-204ENST00000480057 MUSTN1Q8IVN3 82 aa7.45□□□□□ -1.22
VTI1A-204ENST00000480057 TOMM7Q9P0U1 55 aa7.45□□□□□ -1.22
VTI1A-204ENST00000480057 GAGE12HA6NDE8 117 aa7.44□□□□□ -1.22
VTI1A-204ENST00000480057 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
VTI1A-204ENST00000480057 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
VTI1A-204ENST00000480057 UBE2WQ96B02 151 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms