RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 FLNBO75369 2602 aaKnown RBP1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 BRWD1Q9NSI6 2320 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 UBR3Q6ZT12 1888 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 CLPSL1A2RUU4 121 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 CCL3L1P16619 93 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 RPL37AP61513 92 aaKnown RBP1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 SSBP1Q04837 148 aaKnown RBP1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 ZNF56Q15929 161 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 TDRG1Q3Y452 100 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 Q5VV11 94 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 C20orf197Q8N268 126 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 PPP1R1CQ8WVI7 109 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 PRO1854Q9UHT4 67 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 ZDBF2Q9HCK1 2354 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 RGPD2P0DJD1 1756 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 PAPPA2Q9BXP8 1791 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 NHSQ6T4R5 1651 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 MAP2P11137 1827 aaKnown RBP1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 PCDH15Q96QU1 1955 aa1.38□□□□□ -2.19
SMNDC1-205ENST00000477763 HTTP42858 3142 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 LY75O60449 1722 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 C4BP0C0L5 1744 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 ANK1P16157 1881 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 MUC3AQ02505 3323 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 RGPD3A6NKT7 1758 aaPredicted RBP1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 RGPD4Q7Z3J3 1758 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 TRAV22A0A0B4J277 110 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 NBDYA0A0U1RRE5 68 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 LOC101927531A0A1B0GV80 90 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 SYS1-DBNDD2H3BUS1 97 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 COX6CP09669 75 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 TRAPPC2P0DI81 140 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 TRAPPC2BP0DI82 140 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 XAF1Q6GPH4 301 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 Q86TA4 180 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 COX7B2Q8TF08 81 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 DYNLRB1Q9NP97 96 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 MANBALQ9NQG1 85 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 UQCR10Q9UDW1 63 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 LENEPQ9Y5L5 61 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 ARFGEF1Q9Y6D6 1849 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 C4AP0C0L4 1744 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 QSER1Q2KHR3 1735 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 KNDC1Q76NI1 1749 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 PKD1L3Q7Z443 1732 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 IFT172Q9UG01 1749 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 MED13Q9UHV7 2174 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 WDFY4Q6ZS81 3184 aa1.37□□□□□ -2.19
SMNDC1-205ENST00000477763 SCN11AQ9UI33 1791 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 CFAP54Q96N23 3096 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 NCOR2Q9Y618 2525 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 AFDNP55196 1824 aaKnown RBP1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 PSME4Q14997 1843 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 ZNF292O60281 2723 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 TRBV6-7A0A0A0MS04 114 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 LOC285095A0A1B0GVY8 99 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 IGLC7A0M8Q6 106 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 CHKB-CPT1BH3BT56 60 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 H7BZZ5 65 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 HCRTO43612 131 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 BCE1O60756 84 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 APOC3P02656 99 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 FXYD4P59646 89 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 GDF5OSQ5U4N7 250 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 MICAL3Q7RTP6 2002 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 VMO1Q7Z5L0 202 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 Q8N6K4 173 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 ARAP2Q8WZ64 1704 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 NXT2Q9NPJ8 142 aaKnown RBP1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 CDC42SE2Q9NRR3 84 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 NDUFA4L2Q9NRX3 87 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 REV3LO60673 3130 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 TCHHQ07283 1943 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 PPLO60437 1756 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 DMDP11532 3685 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 EP300Q09472 2414 aaPredicted RBP1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 USP34Q70CQ2 3546 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 TRIOO75962 3097 aa1.36□□□□□ -2.19
SMNDC1-205ENST00000477763 TNRC6CQ9HCJ0 1690 aaKnown RBP1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 NAV2Q8IVL1 2488 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 NFAT5O94916 1531 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 ABCC6O95255 1503 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 RP1P56715 2156 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 ZFYVE26Q68DK2 2539 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 DOCK1Q14185 1865 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 ITSN1Q15811 1721 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 ASXL3Q9C0F0 2248 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 KMT2BQ9UMN6 2715 aaPredicted RBP1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 MUC22E2RYF6 1773 aaPredicted RBP1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 EDDM3BP56851 147 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 KLKP1Q107X0 134 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 FXYD3Q14802 87 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 FAM74A4Q5TZK3 123 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 EML5Q05BV3 1969 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 CD163L1Q9NR16 1453 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 C5P01031 1676 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 USP9XQ93008 2570 aaPredicted RBP1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 CFAP47Q6ZTR5 3102 aa1.35□□□□□ -2.19
SMNDC1-205ENST00000477763 MON2Q7Z3U7 1717 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms