RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 UBE2L3P68036 154 aaKnown RBP1.72□□□□□ -2.13
HDAC9-221ENST00000471887 HAMPP81172 84 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 KHDC3LQ587J8 217 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 CFAP126Q5VTH2 177 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 DPPA3Q6W0C5 159 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 SCXQ7RTU7 201 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 OR5C1Q8NGR4 320 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 PRADC1Q9BSG0 188 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 GTSF1LQ9H1H1 148 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 GSKIPQ9P0R6 139 aa1.72□□□□□ -2.13
HDAC9-221ENST00000471887 TRBV24-1A0A075B6N3 115 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 A0A087WWC5 75 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 TRAV8-1A0A0A6YYK1 113 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 FAM25EA8MYX2 175 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 OR10J4P0C629 311 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 MT1HL1P0DM35 61 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
HDAC9-221ENST00000471887 S100A10P60903 97 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 RANP62826 216 aaKnown RBP1.71□□□□□ -2.14
HDAC9-221ENST00000471887 CIRBPQ14011 172 aaKnown RBP1.71□□□□□ -2.14
HDAC9-221ENST00000471887 ACOT6Q3I5F7 207 aaPredicted RBP1.71□□□□□ -2.14
HDAC9-221ENST00000471887 OR10J3Q5JRS4 329 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 FAM74A1Q5RGS3 127 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 LINC00299Q6ZSB3 139 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 ATP6V0E2Q8NHE4 81 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 SUN5Q8TC36 379 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 ASB13Q8WXK3 278 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 CCDC32Q9BV29 185 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 NMES1Q9C002 83 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 HSPB11Q9Y547 144 aa1.71□□□□□ -2.14
HDAC9-221ENST00000471887 TRBV10-1A0A0K0K1A3 114 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 CCDC160A6NGH7 325 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 A8MWV9 139 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 F6UZH7 168 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 GNRH2O43555 120 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 IGHV3-30P01768 117 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 IGHV3-33P01772 117 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 TCRAP04437 139 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 STAG3L2P0CL84 134 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 IGHV3-30-3P0DP02 117 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 IGHV3-30-5P0DP03 117 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 ZNF80P51504 273 aaPredicted RBP1.7□□□□□ -2.14
HDAC9-221ENST00000471887 Q0VG73 95 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 ELOBQ15370 118 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 TAL2Q16559 108 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 Q6ZRU5 148 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 GOLT1AQ6ZVE7 132 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 NIT1Q86X76 327 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 TMEM75Q8N9X5 138 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 C5orf17Q8NAS9 161 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 TREM1Q9NP99 234 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 IL36BQ9NZH7 164 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 OR5AC2Q9NZP5 309 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 RBM12B-AS1Q9P1G2 102 aa1.7□□□□□ -2.14
HDAC9-221ENST00000471887 TRBV6-1A0A0K0K1D8 114 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 A0A1W2PRE2 83 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 PGPA6NDG6 321 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 RBFOX3A6NFN3 312 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 MPC2O95563 127 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 CXCL1P09341 107 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 PET100P0DJ07 73 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 CDC34P49427 236 aaPredicted RBP1.69□□□□□ -2.14
HDAC9-221ENST00000471887 H2BFSP57053 126 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 UBE2D3P61077 147 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 RPL37AP61513 92 aaKnown RBP1.69□□□□□ -2.14
HDAC9-221ENST00000471887 PKIAP61925 76 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 CNBPP62633 177 aaKnown RBP1.69□□□□□ -2.14
HDAC9-221ENST00000471887 UBE2D2P62837 147 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 GNG5P63218 68 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 RPL19P84098 196 aaKnown RBP1.69□□□□□ -2.14
HDAC9-221ENST00000471887 SAPCD1Q5SSQ6 148 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 C9orf163Q8N9P6 203 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 PPP1R1CQ8WVI7 109 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 SFRP2Q96HF1 295 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 TCEAL7Q9BRU2 100 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 PSMG3Q9BT73 122 aaPredicted RBP1.69□□□□□ -2.14
HDAC9-221ENST00000471887 TMEM167BQ9NRX6 74 aa1.69□□□□□ -2.14
HDAC9-221ENST00000471887 TRBV6-8A0A0A6YYG3 113 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 IGHV3-73A0A0B4J1V6 119 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 A0A1W2PPV4 95 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 LECT2O14960 151 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 SIX6O95475 246 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 MBP02144 154 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 ARL14EPLP0DKL9 152 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 GCHFRP30047 84 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 RPL12P30050 165 aaKnown RBP1.68□□□□□ -2.14
HDAC9-221ENST00000471887 ASIPP42127 132 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 RAB2AP61019 212 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 SERF2P84101 59 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 MIAQ16674 131 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 KRTAP26-1Q6PEX3 210 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 ENHOQ6UWT2 76 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 SDIM1Q6ZPB5 146 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 Q86TA4 180 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 S100ZQ8WXG8 99 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 HIST1H2BAQ96A08 127 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 FMC1Q96HJ9 113 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 DNAJC30Q96LL9 226 aa1.68□□□□□ -2.14
HDAC9-221ENST00000471887 HYLS1Q96M11 299 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms