RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 SGK494Q96LW2 274 aa4.14□□□□□ -1.75
SSBP1-204ENST00000465167 C18orf15Q96N68 181 aa4.14□□□□□ -1.75
SSBP1-204ENST00000465167 TPPP3Q9BW30 176 aa4.14□□□□□ -1.75
SSBP1-204ENST00000465167 HUWE1Q7Z6Z7 4374 aaKnown RBP4.14□□□□□ -1.75
SSBP1-204ENST00000465167 LYSTQ99698 3801 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 CSMD3Q7Z407 3707 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 TRBV19A0A075B6N1 114 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 IGLV5-45A0A087WSX0 123 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
SSBP1-204ENST00000465167 H3BT86 120 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 SLC25A20O43772 301 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 DUSP14O95147 198 aaKnown RBP4.13□□□□□ -1.75
SSBP1-204ENST00000465167 PPP1R17O96001 155 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 INSP01308 110 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 IGLV2-11P01706 119 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
SSBP1-204ENST00000465167 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 NFE4Q86UQ8 179 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 C10orf126Q8N4M7 172 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 C15orf53Q8NAA6 179 aa4.13□□□□□ -1.75
SSBP1-204ENST00000465167 IGLV2-18A0A075B6J9 118 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 A0A0B4J2C4 111 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 TRBV7-7A0A0K0K1E9 115 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 H3BRN7 92 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 SH2D1AO60880 128 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 MEIG1Q5JSS6 88 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 TMEM170BQ5T4T1 132 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 UBE2WQ96B02 151 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 CARD19Q96LW7 228 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 SHANK2-AS3Q9BTD1 123 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 MRPL35Q9NZE8 188 aaKnown RBP4.12□□□□□ -1.75
SSBP1-204ENST00000465167 RYR3Q15413 4870 aa4.12□□□□□ -1.75
SSBP1-204ENST00000465167 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 A0A0J9YX75 114 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 A0A1B0GUV1 79 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 LYRM9A8MSI8 78 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 CCDC179H3BU77 68 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 H3BVH4 76 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 UQCRQO14949 82 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 RPL7P18124 248 aaKnown RBP4.11□□□□□ -1.75
SSBP1-204ENST00000465167 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
SSBP1-204ENST00000465167 C1orf134Q5TEV5 83 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 FAM159AQ6UWV7 190 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 PRO1854Q9UHT4 67 aa4.11□□□□□ -1.75
SSBP1-204ENST00000465167 TRAV8-1A0A0A6YYK1 113 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 RBAKDNA6NC62 111 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 F5H768 121 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 F6UB75 175 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 M0R2P5 195 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 M0R381 172 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 TCL1BO95988 128 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 COX6CP09669 75 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 DEFB130BP0DP73 79 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 DEFB130AP0DP74 79 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 CCL18P55774 89 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 SPINK13Q1W4C9 94 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 RNF185Q96GF1 192 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 SLC50A1Q9BRV3 221 aa4.1□□□□□ -1.75
SSBP1-204ENST00000465167 CSDC2Q9Y534 153 aaKnown RBP4.1□□□□□ -1.75
SSBP1-204ENST00000465167 STARD9Q9P2P6 4700 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 C9JAW5 83 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 SOCS3O14543 225 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 HTN1P15515 57 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 DEFB1P60022 68 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 C9orf153Q5TBE3 101 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 MAPKAPK5-AS1Q8N8E1 139 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 RASL10AQ92737 203 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 TOMM6Q96B49 74 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 C16orf74Q96GX8 76 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 LINC01587Q99440 93 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 PRADC1Q9BSG0 188 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.75
SSBP1-204ENST00000465167 TRAV4A0A0B4J268 109 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 C11orf86A6NJI1 115 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 C16orf90A8MZG2 172 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 RTL8CO15255 209 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 ORM1P02763 201 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 CXCL5P42830 114 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 ZNF415Q09FC8 603 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 LINC01620Q4KN68 170 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 C1orf158Q8N1D5 194 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 C3orf22Q8N5N4 141 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 TMEM141Q96I45 108 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 SCGB3A1Q96QR1 104 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 Q9H8V8 135 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
SSBP1-204ENST00000465167 DYNC2H1Q8NCM8 4307 aaKnown RBP4.07□□□□□ -1.76
SSBP1-204ENST00000465167 TRAV12-2A0A075B6T6 113 aa4.07□□□□□ -1.76
SSBP1-204ENST00000465167 A0A0J9YY99 117 aa4.07□□□□□ -1.76
SSBP1-204ENST00000465167 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
SSBP1-204ENST00000465167 A0A1B0GVY2 172 aa4.07□□□□□ -1.76
SSBP1-204ENST00000465167 A8MTW9 85 aa4.07□□□□□ -1.76
SSBP1-204ENST00000465167 SMKR1H3BMG3 65 aa4.07□□□□□ -1.76
SSBP1-204ENST00000465167 ATOX1O00244 68 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms