RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 TRAV13-1A0A0B4J241 112 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 A0A0J9YY99 117 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 TMEM262E9PQX1 116 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 PTTG1IPP53801 180 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 RNASE13Q5GAN3 156 aaKnown RBP7.65□□□□□ -1.18
NEDD9-206ENST00000461055 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 TTTY13Q9BZ97 58 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
NEDD9-206ENST00000461055 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.19
NEDD9-206ENST00000461055 SACSQ9NZJ4 4579 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 IGLV5-39A0A0G2JS06 123 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 A0A1B0GV90 55 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 TIMM17BO60830 172 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 HTN3P15516 51 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 GCSHP23434 173 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 RBX1P62877 108 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
NEDD9-206ENST00000461055 SS18Q15532 418 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 ZFAND6Q6FIF0 208 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 SFTA2Q6UW10 78 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 C11orf45Q8TAV5 145 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 COX11Q9Y6N1 276 aa7.64□□□□□ -1.19
NEDD9-206ENST00000461055 A0A096LPF7 62 aa7.63□□□□□ -1.19
NEDD9-206ENST00000461055 RETNQ9HD89 108 aa7.63□□□□□ -1.19
NEDD9-206ENST00000461055 NDUFA12Q9UI09 145 aa7.63□□□□□ -1.19
NEDD9-206ENST00000461055 IGLV4-60A0A075B6I1 120 aa7.62□□□□□ -1.19
NEDD9-206ENST00000461055 TSPEAR-AS2P59090 65 aa7.62□□□□□ -1.19
NEDD9-206ENST00000461055 HERV-K104P63124 156 aa7.62□□□□□ -1.19
NEDD9-206ENST00000461055 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
NEDD9-206ENST00000461055 COPS9Q8WXC6 57 aa7.62□□□□□ -1.19
NEDD9-206ENST00000461055 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
NEDD9-206ENST00000461055 STAB2Q8WWQ8 2551 aa7.62□□□□□ -1.19
NEDD9-206ENST00000461055 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 A0A0J9YWU9 116 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 A0A0J9YXY3 114 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 LINC00959A0A1B0GUT2 108 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 TAX1BP3O14907 124 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 NDUFA1O15239 70 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 SPINK8P0C7L1 97 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 COX6A2Q02221 97 aa7.61□□□□□ -1.19
NEDD9-206ENST00000461055 A0A087WZ39 114 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 TRAV8-3A0A0A6YYJ7 113 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 IGHV3OR16-9A0A0B4J2B5 98 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 A0A1B0GWB2 263 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 LYPD5Q6UWN5 251 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 Q6ZTC4 211 aa7.6□□□□□ -1.19
NEDD9-206ENST00000461055 IGHV3-64A0A075B6Q5 118 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 TRAV10A0A0B4J240 114 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 C9orf118A6NHY6 69 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 IFITM1P13164 125 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 FXYD2P54710 66 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 RPL24P83731 157 aaKnown RBP7.59□□□□□ -1.19
NEDD9-206ENST00000461055 C15orf53Q8NAA6 179 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 SPANXDQ9BXN6 97 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 PPDPFQ9H3Y8 114 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 SPANXCQ9NY87 97 aa7.59□□□□□ -1.19
NEDD9-206ENST00000461055 CD164L2Q6UWJ8 174 aa7.58□□□□□ -1.2
NEDD9-206ENST00000461055 C10orf126Q8N4M7 172 aa7.58□□□□□ -1.2
NEDD9-206ENST00000461055 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-206ENST00000461055 IGHV3-30P01768 117 aa7.57□□□□□ -1.2
NEDD9-206ENST00000461055 ANGP03950 147 aaKnown RBP7.57□□□□□ -1.2
NEDD9-206ENST00000461055 IGHV3-30-5P0DP03 117 aa7.57□□□□□ -1.2
NEDD9-206ENST00000461055 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
NEDD9-206ENST00000461055 TRAV8-4A0A0B4J246 113 aa7.56□□□□□ -1.2
NEDD9-206ENST00000461055 NANOS2P60321 138 aaKnown RBP7.56□□□□□ -1.2
NEDD9-206ENST00000461055 REG3AQ06141 175 aa7.56□□□□□ -1.2
NEDD9-206ENST00000461055 LINC00269Q8N2A0 174 aa7.56□□□□□ -1.2
NEDD9-206ENST00000461055 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
NEDD9-206ENST00000461055 ZNF625Q96I27 306 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-206ENST00000461055 B9D2Q9BPU9 175 aa7.56□□□□□ -1.2
NEDD9-206ENST00000461055 PRR34Q9NV39 138 aa7.56□□□□□ -1.2
NEDD9-206ENST00000461055 DNAH7Q8WXX0 4024 aa7.55□□□□□ -1.2
NEDD9-206ENST00000461055 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
NEDD9-206ENST00000461055 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-206ENST00000461055 VAMP3Q15836 100 aa7.55□□□□□ -1.2
NEDD9-206ENST00000461055 MIAQ16674 131 aa7.55□□□□□ -1.2
NEDD9-206ENST00000461055 Q9H8V8 135 aa7.55□□□□□ -1.2
NEDD9-206ENST00000461055 COX7A2LO14548 114 aa7.54□□□□□ -1.2
NEDD9-206ENST00000461055 APOMO95445 188 aa7.54□□□□□ -1.2
NEDD9-206ENST00000461055 UBE2V1Q13404 147 aa7.54□□□□□ -1.2
NEDD9-206ENST00000461055 GTF2H5Q6ZYL4 71 aa7.54□□□□□ -1.2
NEDD9-206ENST00000461055 LITAFQ99732 161 aa7.54□□□□□ -1.2
NEDD9-206ENST00000461055 DNAH1Q9P2D7 4330 aa7.54□□□□□ -1.2
NEDD9-206ENST00000461055 A0A0B4J2C4 111 aa7.53□□□□□ -1.2
NEDD9-206ENST00000461055 PRSS2P07478 247 aa7.53□□□□□ -1.2
NEDD9-206ENST00000461055 FABP2P12104 132 aa7.53□□□□□ -1.2
NEDD9-206ENST00000461055 CXCL5P42830 114 aa7.53□□□□□ -1.2
NEDD9-206ENST00000461055 LYRM7Q5U5X0 104 aa7.53□□□□□ -1.2
NEDD9-206ENST00000461055 Q8IZM0 81 aa7.53□□□□□ -1.2
NEDD9-206ENST00000461055 CHCHD10Q8WYQ3 142 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-206ENST00000461055 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
NEDD9-206ENST00000461055 CRPP02741 224 aa7.52□□□□□ -1.21
NEDD9-206ENST00000461055 XCL1P47992 114 aa7.52□□□□□ -1.21
NEDD9-206ENST00000461055 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms