RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
CLSTN1-203ENST00000435891 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-203ENST00000435891 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
CLSTN1-203ENST00000435891 CITED2Q99967 270 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-203ENST00000435891 PDZD2O15018 2839 aa7.49□□□□□ -1.21
CLSTN1-203ENST00000435891 INSP01308 110 aa7.49□□□□□ -1.21
CLSTN1-203ENST00000435891 A0A1B0GX51 115 aa7.48□□□□□ -1.21
CLSTN1-203ENST00000435891 DNAJC9-AS1A6NH13 148 aa7.48□□□□□ -1.21
CLSTN1-203ENST00000435891 COX7CP15954 63 aa7.48□□□□□ -1.21
CLSTN1-203ENST00000435891 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
CLSTN1-203ENST00000435891 H3BT86 120 aa7.48□□□□□ -1.21
CLSTN1-203ENST00000435891 NOTCH2Q04721 2471 aa7.48□□□□□ -1.21
CLSTN1-203ENST00000435891 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 TRBV7-7A0A0K0K1E9 115 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 NDUFA12Q9UI09 145 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
CLSTN1-203ENST00000435891 TRGV1A0A0A0MS02 117 aa7.46□□□□□ -1.21
CLSTN1-203ENST00000435891 A0A0B4J2C4 111 aa7.46□□□□□ -1.21
CLSTN1-203ENST00000435891 LINC00643Q86TS7 51 aa7.46□□□□□ -1.21
CLSTN1-203ENST00000435891 WFDC10AQ9H1F0 79 aa7.46□□□□□ -1.21
CLSTN1-203ENST00000435891 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
CLSTN1-203ENST00000435891 COX6A2Q02221 97 aa7.46□□□□□ -1.22
CLSTN1-203ENST00000435891 Q6ZTI0 123 aa7.46□□□□□ -1.22
CLSTN1-203ENST00000435891 STHQ8IWL8 128 aa7.46□□□□□ -1.22
CLSTN1-203ENST00000435891 DAND5Q8N907 189 aa7.46□□□□□ -1.22
CLSTN1-203ENST00000435891 CCL24O00175 119 aa7.45□□□□□ -1.22
CLSTN1-203ENST00000435891 SDIM1Q6ZPB5 146 aa7.45□□□□□ -1.22
CLSTN1-203ENST00000435891 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
CLSTN1-203ENST00000435891 FN1P02751 2386 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-203ENST00000435891 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
CLSTN1-203ENST00000435891 ATOX1O00244 68 aa7.44□□□□□ -1.22
CLSTN1-203ENST00000435891 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
CLSTN1-203ENST00000435891 IL17DQ8TAD2 202 aa7.44□□□□□ -1.22
CLSTN1-203ENST00000435891 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
CLSTN1-203ENST00000435891 GIG44P09565 113 aaPredicted RBP7.43□□□□□ -1.22
CLSTN1-203ENST00000435891 PLA2G2AP14555 144 aa7.43□□□□□ -1.22
CLSTN1-203ENST00000435891 FAM240AA0A1B0GVK7 77 aa7.43□□□□□ -1.22
CLSTN1-203ENST00000435891 NBEAL2Q6ZNJ1 2754 aa7.43□□□□□ -1.22
CLSTN1-203ENST00000435891 HELZ2Q9BYK8 2649 aaKnown RBP7.43□□□□□ -1.22
CLSTN1-203ENST00000435891 ACYP1P07311 99 aa7.43□□□□□ -1.22
CLSTN1-203ENST00000435891 TMEM86BQ8N661 226 aa7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 DPH3Q96FX2 82 aa7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 ZNF625Q96I27 306 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 DGAT2L7PQ6IED9 249 aa7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 NOP10Q9NPE3 64 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 VWFP04275 2813 aa7.42□□□□□ -1.22
CLSTN1-203ENST00000435891 WIPF1O43516 503 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 DNAL4O96015 105 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 BAALC-AS2P0C853 105 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 MIAQ16674 131 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 LINC01006Q8NI28 216 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 SPANXDQ9BXN6 97 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 DAZ3Q9NR90 486 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 SPANXCQ9NY87 97 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 KRTAP1-1Q07627 177 aa7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-203ENST00000435891 A0A087WVE0 104 aa7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 LST1O00453 97 aa7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 CYSTM1Q9H1C7 97 aa7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 LOC100131303A0A0U1RQF7 123 aa7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 K7EQD1 137 aa7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 RPL35AP18077 110 aaKnown RBP7.4□□□□□ -1.22
CLSTN1-203ENST00000435891 UNC79Q9P2D8 2635 aa7.4□□□□□ -1.23
CLSTN1-203ENST00000435891 A0A0U1RQV1 116 aa7.4□□□□□ -1.23
CLSTN1-203ENST00000435891 PLAC8L1A1L4L8 177 aa7.4□□□□□ -1.23
CLSTN1-203ENST00000435891 ATP5G1P05496 136 aa7.4□□□□□ -1.23
CLSTN1-203ENST00000435891 TIRAPP58753 221 aa7.39□□□□□ -1.23
CLSTN1-203ENST00000435891 TMEM258P61165 79 aa7.39□□□□□ -1.23
CLSTN1-203ENST00000435891 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-203ENST00000435891 RPL36AP83881 106 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-203ENST00000435891 RPL36ALQ969Q0 106 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-203ENST00000435891 Q9H8V8 135 aa7.39□□□□□ -1.23
CLSTN1-203ENST00000435891 FASNP49327 2511 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 CRYGAP11844 174 aa7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 SMIM1B2RUZ4 78 aa7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 NDUFA1O15239 70 aa7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 MRAPQ8TCY5 172 aa7.38□□□□□ -1.23
CLSTN1-203ENST00000435891 Q9HAA7 133 aa7.37□□□□□ -1.23
CLSTN1-203ENST00000435891 PFN2P35080 140 aa7.37□□□□□ -1.23
CLSTN1-203ENST00000435891 CDC42SE2Q9NRR3 84 aa7.37□□□□□ -1.23
CLSTN1-203ENST00000435891 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
CLSTN1-203ENST00000435891 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
CLSTN1-203ENST00000435891 HIVEP2P31629 2446 aa7.36□□□□□ -1.23
CLSTN1-203ENST00000435891 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
CLSTN1-203ENST00000435891 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
CLSTN1-203ENST00000435891 TRGV2A0A075B6R0 118 aa7.35□□□□□ -1.23
CLSTN1-203ENST00000435891 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
CLSTN1-203ENST00000435891 IGLV1-51P01701 117 aa7.35□□□□□ -1.23
CLSTN1-203ENST00000435891 CSNK1G2-AS1Q8NCQ2 148 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms