RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 VSIG2Q96IQ7 327 aa11.07□□□□□ -0.64
AFF3-208ENST00000427118 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
AFF3-208ENST00000427118 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
AFF3-208ENST00000427118 DNAH17Q9UFH2 4485 aa11.06□□□□□ -0.64
AFF3-208ENST00000427118 H3BRM9 83 aa11.06□□□□□ -0.64
AFF3-208ENST00000427118 M0R2N4 97 aa11.06□□□□□ -0.64
AFF3-208ENST00000427118 FAM104AQ969W3 186 aa11.06□□□□□ -0.64
AFF3-208ENST00000427118 HECTD4Q9Y4D8 3996 aa11.06□□□□□ -0.64
AFF3-208ENST00000427118 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 LEPROTO15243 131 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 ZNF22P17026 224 aaPredicted RBP11.05□□□□□ -0.64
AFF3-208ENST00000427118 HERVK_113P63121 156 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 TAL2Q16559 108 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 MPV17L2Q567V2 206 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 FAM19A3Q7Z5A8 133 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 CHCHD5Q9BSY4 110 aa11.05□□□□□ -0.64
AFF3-208ENST00000427118 LGALS3P17931 250 aaKnown RBP11.04□□□□□ -0.64
AFF3-208ENST00000427118 UBE2D1P51668 147 aa11.04□□□□□ -0.64
AFF3-208ENST00000427118 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
AFF3-208ENST00000427118 BVES-AS1Q5T3Y7 98 aa11.04□□□□□ -0.64
AFF3-208ENST00000427118 CDC42SE2Q9NRR3 84 aa11.04□□□□□ -0.64
AFF3-208ENST00000427118 ICOSQ9Y6W8 199 aa11.04□□□□□ -0.64
AFF3-208ENST00000427118 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
AFF3-208ENST00000427118 A0A096LPF7 62 aa11.02□□□□□ -0.65
AFF3-208ENST00000427118 A6NDN8 102 aa11.02□□□□□ -0.65
AFF3-208ENST00000427118 J3QQQ9 107 aa11.02□□□□□ -0.65
AFF3-208ENST00000427118 MAPKAPK5-AS1Q8N8E1 139 aa11.02□□□□□ -0.65
AFF3-208ENST00000427118 ORAOV1Q8WV07 137 aa11.02□□□□□ -0.65
AFF3-208ENST00000427118 TP73-AS1Q9UF72 201 aa11.02□□□□□ -0.65
AFF3-208ENST00000427118 CCL18P55774 89 aa11.01□□□□□ -0.65
AFF3-208ENST00000427118 GAGE6Q13070 117 aa11.01□□□□□ -0.65
AFF3-208ENST00000427118 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
AFF3-208ENST00000427118 SCGB1D4Q6XE38 83 aa11.01□□□□□ -0.65
AFF3-208ENST00000427118 LINC00469Q8N7U9 141 aa11.01□□□□□ -0.65
AFF3-208ENST00000427118 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
AFF3-208ENST00000427118 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
AFF3-208ENST00000427118 IGHV1-58A0A0C4DH39 117 aa10.99□□□□□ -0.65
AFF3-208ENST00000427118 A0A1B0GUV1 79 aa10.99□□□□□ -0.65
AFF3-208ENST00000427118 RTL8CO15255 209 aa10.99□□□□□ -0.65
AFF3-208ENST00000427118 Q6ZR54 194 aa10.98□□□□□ -0.65
AFF3-208ENST00000427118 HIST1H4GQ99525 98 aa10.98□□□□□ -0.65
AFF3-208ENST00000427118 LINC00588Q9Y4M8 146 aa10.98□□□□□ -0.65
AFF3-208ENST00000427118 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
AFF3-208ENST00000427118 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
AFF3-208ENST00000427118 TMEM262E9PQX1 116 aa10.97□□□□□ -0.65
AFF3-208ENST00000427118 CCL25O15444 150 aa10.97□□□□□ -0.65
AFF3-208ENST00000427118 ESRGQ1W209 222 aa10.97□□□□□ -0.65
AFF3-208ENST00000427118 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
AFF3-208ENST00000427118 A0A1B0GV90 55 aa10.96□□□□□ -0.65
AFF3-208ENST00000427118 IGHV3-30-3P0DP02 117 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 GCSHP23434 173 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 LELP1Q5T871 98 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 LYPD5Q6UWN5 251 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 CEND1Q8N111 149 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 PKD1P98161 4303 aa10.95□□□□□ -0.66
AFF3-208ENST00000427118 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
AFF3-208ENST00000427118 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
AFF3-208ENST00000427118 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
AFF3-208ENST00000427118 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
AFF3-208ENST00000427118 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
AFF3-208ENST00000427118 A0A1B0GVY2 172 aa10.93□□□□□ -0.66
AFF3-208ENST00000427118 A6NJY4 79 aa10.93□□□□□ -0.66
AFF3-208ENST00000427118 RBX1P62877 108 aa10.93□□□□□ -0.66
AFF3-208ENST00000427118 UPK3BQ9BT76 320 aa10.93□□□□□ -0.66
AFF3-208ENST00000427118 IGLV4-60A0A075B6I1 120 aa10.92□□□□□ -0.66
AFF3-208ENST00000427118 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
AFF3-208ENST00000427118 SPINK8P0C7L1 97 aa10.92□□□□□ -0.66
AFF3-208ENST00000427118 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
AFF3-208ENST00000427118 SS18Q15532 418 aa10.92□□□□□ -0.66
AFF3-208ENST00000427118 DYNC1H1Q14204 4646 aaKnown RBP10.91□□□□□ -0.66
AFF3-208ENST00000427118 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
AFF3-208ENST00000427118 SMIM13P0DJ93 91 aa10.91□□□□□ -0.66
AFF3-208ENST00000427118 COX6A2Q02221 97 aa10.91□□□□□ -0.66
AFF3-208ENST00000427118 LINC00336Q6ZUF6 198 aa10.91□□□□□ -0.66
AFF3-208ENST00000427118 Q9H8V8 135 aa10.91□□□□□ -0.66
AFF3-208ENST00000427118 NDUFA12Q9UI09 145 aa10.91□□□□□ -0.66
AFF3-208ENST00000427118 TRAV8-3A0A0A6YYJ7 113 aa10.9□□□□□ -0.66
AFF3-208ENST00000427118 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
AFF3-208ENST00000427118 COX11Q9Y6N1 276 aa10.9□□□□□ -0.66
AFF3-208ENST00000427118 NBDYA0A0U1RRE5 68 aa10.89□□□□□ -0.67
AFF3-208ENST00000427118 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 TIMM17BO60830 172 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 C1orf134Q5TEV5 83 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 Q6ZVH6 145 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 LINC01561Q8N1V8 128 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 KRTAP1-5Q9BYS1 174 aa10.88□□□□□ -0.67
AFF3-208ENST00000427118 SMIM1B2RUZ4 78 aa10.87□□□□□ -0.67
AFF3-208ENST00000427118 TAX1BP3O14907 124 aa10.87□□□□□ -0.67
AFF3-208ENST00000427118 NDUFA1O15239 70 aa10.87□□□□□ -0.67
AFF3-208ENST00000427118 FXYD2P54710 66 aa10.87□□□□□ -0.67
AFF3-208ENST00000427118 HERV-K104P63124 156 aa10.87□□□□□ -0.67
AFF3-208ENST00000427118 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
AFF3-208ENST00000427118 IGKV3OR2-268A0A0C4DH90 116 aa10.86□□□□□ -0.67
AFF3-208ENST00000427118 A0A0J9YXY3 114 aa10.86□□□□□ -0.67
AFF3-208ENST00000427118 SFTA2Q6UW10 78 aa10.86□□□□□ -0.67
AFF3-208ENST00000427118 COPS9Q8WXC6 57 aa10.86□□□□□ -0.67
AFF3-208ENST00000427118 HERC2O95714 4834 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms