RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SETXQ7Z333 2677 aaKnown RBP9.42□□□□□ -0.9
COL12A1-205ENST00000425443 IGHV3-53P01767 116 aa9.42□□□□□ -0.9
COL12A1-205ENST00000425443 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
COL12A1-205ENST00000425443 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
COL12A1-205ENST00000425443 CCL24O00175 119 aa9.41□□□□□ -0.9
COL12A1-205ENST00000425443 IGHV3-33P01772 117 aa9.41□□□□□ -0.9
COL12A1-205ENST00000425443 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
COL12A1-205ENST00000425443 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
COL12A1-205ENST00000425443 TRAV13-1A0A0B4J241 112 aa9.4□□□□□ -0.9
COL12A1-205ENST00000425443 DAND5Q8N907 189 aa9.4□□□□□ -0.9
COL12A1-205ENST00000425443 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.91
COL12A1-205ENST00000425443 LITAFQ99732 161 aa9.4□□□□□ -0.91
COL12A1-205ENST00000425443 TIMM21Q9BVV7 248 aa9.4□□□□□ -0.91
COL12A1-205ENST00000425443 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
COL12A1-205ENST00000425443 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
COL12A1-205ENST00000425443 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-205ENST00000425443 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
COL12A1-205ENST00000425443 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
COL12A1-205ENST00000425443 ESM1Q9NQ30 184 aa9.38□□□□□ -0.91
COL12A1-205ENST00000425443 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
COL12A1-205ENST00000425443 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
COL12A1-205ENST00000425443 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
COL12A1-205ENST00000425443 A8MTW9 85 aa9.37□□□□□ -0.91
COL12A1-205ENST00000425443 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
COL12A1-205ENST00000425443 DGAT2L7PQ6IED9 249 aa9.37□□□□□ -0.91
COL12A1-205ENST00000425443 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
COL12A1-205ENST00000425443 COX7CP15954 63 aa9.36□□□□□ -0.91
COL12A1-205ENST00000425443 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
COL12A1-205ENST00000425443 NDUFA12Q9UI09 145 aa9.36□□□□□ -0.91
COL12A1-205ENST00000425443 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
COL12A1-205ENST00000425443 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
COL12A1-205ENST00000425443 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
COL12A1-205ENST00000425443 A0A0B4J2C4 111 aa9.34□□□□□ -0.91
COL12A1-205ENST00000425443 TRIAP1O43715 76 aa9.34□□□□□ -0.91
COL12A1-205ENST00000425443 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
COL12A1-205ENST00000425443 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
COL12A1-205ENST00000425443 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.92
COL12A1-205ENST00000425443 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.92
COL12A1-205ENST00000425443 LINC01006Q8NI28 216 aa9.33□□□□□ -0.92
COL12A1-205ENST00000425443 IGKV3OR2-268A0A0C4DH90 116 aa9.33□□□□□ -0.92
COL12A1-205ENST00000425443 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
COL12A1-205ENST00000425443 UBE2D4Q9Y2X8 147 aa9.33□□□□□ -0.92
COL12A1-205ENST00000425443 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
COL12A1-205ENST00000425443 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
COL12A1-205ENST00000425443 TMEM258P61165 79 aa9.32□□□□□ -0.92
COL12A1-205ENST00000425443 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
COL12A1-205ENST00000425443 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
COL12A1-205ENST00000425443 UBE2WQ96B02 151 aa9.32□□□□□ -0.92
COL12A1-205ENST00000425443 CRYGAP11844 174 aa9.31□□□□□ -0.92
COL12A1-205ENST00000425443 CLEC2BQ92478 149 aa9.31□□□□□ -0.92
COL12A1-205ENST00000425443 IGHV1-58A0A0C4DH39 117 aa9.31□□□□□ -0.92
COL12A1-205ENST00000425443 BEAN1Q3B7T3 259 aa9.31□□□□□ -0.92
COL12A1-205ENST00000425443 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
COL12A1-205ENST00000425443 TRBV7-7A0A0K0K1E9 115 aa9.31□□□□□ -0.92
COL12A1-205ENST00000425443 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
COL12A1-205ENST00000425443 LINC01620Q4KN68 170 aa9.3□□□□□ -0.92
COL12A1-205ENST00000425443 Q6ZTI0 123 aa9.3□□□□□ -0.92
COL12A1-205ENST00000425443 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
COL12A1-205ENST00000425443 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
COL12A1-205ENST00000425443 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
COL12A1-205ENST00000425443 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
COL12A1-205ENST00000425443 PLA2G2AP14555 144 aa9.29□□□□□ -0.92
COL12A1-205ENST00000425443 J3QKU1 62 aa9.29□□□□□ -0.92
COL12A1-205ENST00000425443 COX6A2Q02221 97 aa9.29□□□□□ -0.92
COL12A1-205ENST00000425443 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
COL12A1-205ENST00000425443 HECTD1Q9ULT8 2610 aa9.28□□□□□ -0.92
COL12A1-205ENST00000425443 RNASE1P07998 156 aaKnown RBP9.28□□□□□ -0.92
COL12A1-205ENST00000425443 CMC4P56277 68 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-205ENST00000425443 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-205ENST00000425443 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.92
COL12A1-205ENST00000425443 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
COL12A1-205ENST00000425443 MIAQ16674 131 aa9.27□□□□□ -0.93
COL12A1-205ENST00000425443 ICOSQ9Y6W8 199 aa9.27□□□□□ -0.93
COL12A1-205ENST00000425443 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
COL12A1-205ENST00000425443 SPANXCQ9NY87 97 aa9.27□□□□□ -0.93
COL12A1-205ENST00000425443 H7C423 109 aa9.26□□□□□ -0.93
COL12A1-205ENST00000425443 K7EQD1 137 aa9.26□□□□□ -0.93
COL12A1-205ENST00000425443 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
COL12A1-205ENST00000425443 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
COL12A1-205ENST00000425443 Q9H8V8 135 aa9.26□□□□□ -0.93
COL12A1-205ENST00000425443 LOC100131303A0A0U1RQF7 123 aa9.25□□□□□ -0.93
COL12A1-205ENST00000425443 KRTAP1-1Q07627 177 aa9.25□□□□□ -0.93
COL12A1-205ENST00000425443 UBE2L6O14933 153 aa9.25□□□□□ -0.93
COL12A1-205ENST00000425443 RPL13AP40429 203 aaKnown RBP9.25□□□□□ -0.93
COL12A1-205ENST00000425443 TRBV10-2A0A0K0K1G8 114 aa9.24□□□□□ -0.93
COL12A1-205ENST00000425443 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
COL12A1-205ENST00000425443 PF4P02776 101 aa9.24□□□□□ -0.93
COL12A1-205ENST00000425443 TRGV4A0A0C4DH28 118 aa9.23□□□□□ -0.93
COL12A1-205ENST00000425443 TRBV10-1A0A0K0K1A3 114 aa9.23□□□□□ -0.93
COL12A1-205ENST00000425443 SMR3AQ99954 134 aa9.23□□□□□ -0.93
COL12A1-205ENST00000425443 UNC79Q9P2D8 2635 aa9.23□□□□□ -0.93
COL12A1-205ENST00000425443 DAZ2Q13117 558 aaKnown RBP9.23□□□□□ -0.93
COL12A1-205ENST00000425443 DAZ4Q86SG3 579 aaKnown RBP9.23□□□□□ -0.93
COL12A1-205ENST00000425443 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
COL12A1-205ENST00000425443 DAZ3Q9NR90 486 aaKnown RBP9.23□□□□□ -0.93
COL12A1-205ENST00000425443 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
COL12A1-205ENST00000425443 IGLV1-51P01701 117 aa9.22□□□□□ -0.93
COL12A1-205ENST00000425443 PRIMA1Q86XR5 153 aa9.22□□□□□ -0.93
COL12A1-205ENST00000425443 VWFP04275 2813 aa9.22□□□□□ -0.93
COL12A1-205ENST00000425443 HILS1P60008 231 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms