RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 LYRM7Q5U5X0 104 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
MCF2L-213ENST00000421756 FHL3Q13643 280 aa9.48□□□□□ -0.89
MCF2L-213ENST00000421756 Q8N3U1 123 aa9.48□□□□□ -0.89
MCF2L-213ENST00000421756 ANK3Q12955 4377 aaKnown RBP9.48□□□□□ -0.89
MCF2L-213ENST00000421756 KRTAP10-3P60369 221 aa9.48□□□□□ -0.89
MCF2L-213ENST00000421756 LINC00158P58513 81 aa9.48□□□□□ -0.89
MCF2L-213ENST00000421756 LY6G6DO95868 133 aa9.47□□□□□ -0.89
MCF2L-213ENST00000421756 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
MCF2L-213ENST00000421756 BEAN1Q3B7T3 259 aa9.47□□□□□ -0.89
MCF2L-213ENST00000421756 LITAFQ99732 161 aa9.47□□□□□ -0.89
MCF2L-213ENST00000421756 GYPEP15421 78 aa9.47□□□□□ -0.89
MCF2L-213ENST00000421756 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.46□□□□□ -0.89
MCF2L-213ENST00000421756 C2orf82Q6UX34 121 aa9.46□□□□□ -0.89
MCF2L-213ENST00000421756 ICOSQ9Y6W8 199 aa9.46□□□□□ -0.89
MCF2L-213ENST00000421756 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 MIAQ16674 131 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 TEN1Q86WV5 123 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 TRAV4A0A0B4J268 109 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
MCF2L-213ENST00000421756 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 CDC42SE2Q9NRR3 84 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 RNASE1P07998 156 aaKnown RBP9.44□□□□□ -0.9
MCF2L-213ENST00000421756 COX6CP09669 75 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 DNAJC30Q96LL9 226 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 XGP55808 180 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 HERVK_113P63121 156 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 ZFAND6Q6FIF0 208 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
MCF2L-213ENST00000421756 TRBV20-1A0A075B6N2 111 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 SOSTDC1Q6X4U4 206 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 PPDPFLQ8WWR9 84 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 PLAC8L1A1L4L8 177 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 Q9HAA7 133 aa9.43□□□□□ -0.9
MCF2L-213ENST00000421756 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
MCF2L-213ENST00000421756 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
MCF2L-213ENST00000421756 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
MCF2L-213ENST00000421756 CLUHP3Q96NS8 147 aa9.42□□□□□ -0.9
MCF2L-213ENST00000421756 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
MCF2L-213ENST00000421756 A8MTW9 85 aa9.42□□□□□ -0.9
MCF2L-213ENST00000421756 HILS1P60008 231 aa9.42□□□□□ -0.9
MCF2L-213ENST00000421756 FAM222AQ5U5X8 452 aa9.42□□□□□ -0.9
MCF2L-213ENST00000421756 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
MCF2L-213ENST00000421756 A0A0B4J2C4 111 aa9.4□□□□□ -0.9
MCF2L-213ENST00000421756 SVIPQ8NHG7 77 aa9.4□□□□□ -0.9
MCF2L-213ENST00000421756 FHL2Q14192 279 aa9.4□□□□□ -0.9
MCF2L-213ENST00000421756 PAX4O43316 350 aa9.4□□□□□ -0.91
MCF2L-213ENST00000421756 C6orf226Q5I0X4 101 aa9.4□□□□□ -0.91
MCF2L-213ENST00000421756 TENM3Q9P273 2699 aa9.4□□□□□ -0.91
MCF2L-213ENST00000421756 CDIP1Q9H305 208 aa9.39□□□□□ -0.91
MCF2L-213ENST00000421756 ATP5G1P05496 136 aa9.39□□□□□ -0.91
MCF2L-213ENST00000421756 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
MCF2L-213ENST00000421756 F5H768 121 aa9.39□□□□□ -0.91
MCF2L-213ENST00000421756 TTC32Q5I0X7 151 aa9.39□□□□□ -0.91
MCF2L-213ENST00000421756 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
MCF2L-213ENST00000421756 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
MCF2L-213ENST00000421756 NDUFA1O15239 70 aa9.38□□□□□ -0.91
MCF2L-213ENST00000421756 ATP6V0E2Q8NHE4 81 aa9.38□□□□□ -0.91
MCF2L-213ENST00000421756 TRBV10-1A0A0K0K1A3 114 aa9.38□□□□□ -0.91
MCF2L-213ENST00000421756 TEX29Q8N6K0 151 aa9.38□□□□□ -0.91
MCF2L-213ENST00000421756 H7C423 109 aa9.37□□□□□ -0.91
MCF2L-213ENST00000421756 TIRAPP58753 221 aa9.37□□□□□ -0.91
MCF2L-213ENST00000421756 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
MCF2L-213ENST00000421756 ANGP03950 147 aaKnown RBP9.37□□□□□ -0.91
MCF2L-213ENST00000421756 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
MCF2L-213ENST00000421756 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
MCF2L-213ENST00000421756 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-213ENST00000421756 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-213ENST00000421756 LINC00269Q8N2A0 174 aa9.36□□□□□ -0.91
MCF2L-213ENST00000421756 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
MCF2L-213ENST00000421756 CKS1BP61024 79 aa9.35□□□□□ -0.91
MCF2L-213ENST00000421756 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
MCF2L-213ENST00000421756 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
MCF2L-213ENST00000421756 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
MCF2L-213ENST00000421756 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
MCF2L-213ENST00000421756 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
MCF2L-213ENST00000421756 SLPIP03973 132 aa9.34□□□□□ -0.91
MCF2L-213ENST00000421756 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
MCF2L-213ENST00000421756 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
MCF2L-213ENST00000421756 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 TRBV6-4A0A1B0GX49 114 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 CELA1Q9UNI1 258 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 DAD1P61803 113 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 RETNQ9HD89 108 aa9.33□□□□□ -0.92
MCF2L-213ENST00000421756 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
MCF2L-213ENST00000421756 CRPP02741 224 aa9.32□□□□□ -0.92
MCF2L-213ENST00000421756 CRYBA4P53673 196 aa9.32□□□□□ -0.92
MCF2L-213ENST00000421756 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
MCF2L-213ENST00000421756 SBSPONQ8IVN8 264 aa9.32□□□□□ -0.92
MCF2L-213ENST00000421756 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
MCF2L-213ENST00000421756 SNCGO76070 127 aa9.31□□□□□ -0.92
MCF2L-213ENST00000421756 C16orf95Q9H693 158 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms