RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CICQ96RK0 1608 aaPredicted RBP1.77□□□□□ -2.13
CTDSPL-203ENST00000416688 PRRC2BQ5JSZ5 2229 aaKnown RBP1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 SIP14410 1827 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 IGKV2-24A0A0C4DH68 120 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 LINC01549A6NIU2 74 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 H0Y9P7 68 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 RNASE3P12724 160 aaKnown RBP1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 MT3P25713 68 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 WFDC6Q9BQY6 131 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 TTTY12Q9BZ98 90 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 SHPRHQ149N8 1683 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 CTTNBP2Q8WZ74 1663 aa1.76□□□□□ -2.13
CTDSPL-203ENST00000416688 MED12Q93074 2177 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 SCN7AQ01118 1682 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 CR1P17927 2039 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 TRBV30A0A0K0K1B3 111 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 NBDYA0A0U1RRE5 68 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 INE1O15225 51 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 PRH1P02810 166 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 FXYD3Q14802 87 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 FDCSPQ8NFU4 85 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 CYYR1Q96J86 154 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 ANAPC11Q9NYG5 84 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 ALKQ9UM73 1620 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 BIVM-ERCC5R4GMW8 1640 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 ABCC6O95255 1503 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 MYO7BQ6PIF6 2116 aa1.75□□□□□ -2.13
CTDSPL-203ENST00000416688 RREB1Q92766 1687 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 ADCY10Q96PN6 1610 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 TRGV4A0A0C4DH28 118 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 M0R2N4 97 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 SPTBP11277 2137 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 S100A3P33764 101 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 ZNF137PP52743 207 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 LINC00315P59091 139 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 PRR9Q5T870 116 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 SPINK14Q6IE38 97 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 DEFB107AQ8IZN7 70 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 TMEM263Q8WUH6 116 aaKnown RBP1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 LINC00208Q96KT6 92 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 SPRR4Q96PI1 79 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 NMES1Q9C002 83 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 ARFGEF1Q9Y6D6 1849 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 BRWD1Q9NSI6 2320 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 NUP188Q5SRE5 1749 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 WIZO95785 1651 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 ARFGEF3Q5TH69 2177 aa1.74□□□□□ -2.13
CTDSPL-203ENST00000416688 LRP6O75581 1613 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 ESPL1Q14674 2120 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 NHSL1Q5SYE7 1610 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 PHRF1Q9P1Y6 1649 aaKnown RBP1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 IQGAP2Q13576 1575 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 EFCAB6Q5THR3 1501 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 MYO7AQ13402 2215 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 UNC13CQ8NB66 2214 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 IGLV3-19P01714 112 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 IFI6P09912 130 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 NREPQ16612 68 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 PLAC8Q9NZF1 115 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 SEC16AO15027 2179 aa1.73□□□□□ -2.13
CTDSPL-203ENST00000416688 ERCC6L2Q5T890 1561 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 SHROOM3Q8TF72 1996 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 PKD1L3Q7Z443 1732 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 A0A087WTM6 91 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 TRAV1-2A0A0B4J238 106 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 LRCOL1A6NCL2 159 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 FXYD4P59646 89 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 GDF5OSQ5U4N7 250 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 SPATA8Q6RVD6 105 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 COA5Q86WW8 74 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 TXNDC17Q9BRA2 123 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 UBL5Q9BZL1 73 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 TSC2P49815 1807 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 ABCA5Q8WWZ7 1642 aa1.72□□□□□ -2.13
CTDSPL-203ENST00000416688 MDC1Q14676 2089 aaKnown RBP1.71□□□□□ -2.13
CTDSPL-203ENST00000416688 TNRC6BQ9UPQ9 1833 aaKnown RBP1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 NESP48681 1621 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 EIF2AK4Q9P2K8 1649 aaKnown RBP1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 TRAV21A0A0B4J279 112 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 TRBV6-1A0A0K0K1D8 114 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 CAV3P56539 151 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 NCBP2-AS2Q69YL0 99 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 WFDC9Q8NEX5 89 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 CMC2Q9NRP2 79 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 ABCA4P78363 2273 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 ZMYM4Q5VZL5 1548 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 C3P01024 1663 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 C5P01031 1676 aa1.71□□□□□ -2.14
CTDSPL-203ENST00000416688 ANKRD36A6QL64 1941 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 IGKV4-1P06312 121 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 ACYP2P14621 99 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 FCER1GP30273 86 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 SERF2P84101 59 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 C10orf113Q5VZT2 155 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 RICTORQ6R327 1708 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms