RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 COX6CP09669 75 aa8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 DAND5Q8N907 189 aa8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 ICOSQ9Y6W8 199 aa8.11□□□□□ -1.11
TRAFD1-202ENST00000412615 MTORP42345 2549 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 F5H768 121 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 PRIMA1Q86XR5 153 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 ITPR2Q14571 2701 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 HERV-K104P63124 156 aa8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 ZNF625Q96I27 306 aaPredicted RBP8.1□□□□□ -1.11
TRAFD1-202ENST00000412615 GAGE6Q13070 117 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 LINC01620Q4KN68 170 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 LINC00308Q8TCZ7 52 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 CITED1Q99966 193 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 SETXQ7Z333 2677 aaKnown RBP8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 CRLF1O75462 422 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 MEIG1Q5JSS6 88 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 ANKRD29Q8N6D5 301 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 CARD19Q96LW7 228 aa8.09□□□□□ -1.11
TRAFD1-202ENST00000412615 DEFB130BP0DP73 79 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 DEFB130AP0DP74 79 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 HIVEP2P31629 2446 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 UNC79Q9P2D8 2635 aa8.08□□□□□ -1.12
TRAFD1-202ENST00000412615 SMIM9A6NGZ8 99 aa8.07□□□□□ -1.12
TRAFD1-202ENST00000412615 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-202ENST00000412615 JMJD1CQ15652 2540 aa8.07□□□□□ -1.12
TRAFD1-202ENST00000412615 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
TRAFD1-202ENST00000412615 LINC01600Q96MT4 127 aa8.07□□□□□ -1.12
TRAFD1-202ENST00000412615 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
TRAFD1-202ENST00000412615 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 C9orf66Q5T8R8 295 aa8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 KMT2BQ9UMN6 2715 aaPredicted RBP8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 X6R8D5 127 aa8.06□□□□□ -1.12
TRAFD1-202ENST00000412615 IGKV3OR2-268A0A0C4DH90 116 aa8.05□□□□□ -1.12
TRAFD1-202ENST00000412615 PPDPFQ9H3Y8 114 aa8.05□□□□□ -1.12
TRAFD1-202ENST00000412615 COX7B2Q8TF08 81 aa8.05□□□□□ -1.12
TRAFD1-202ENST00000412615 GYPEP15421 78 aa8.04□□□□□ -1.12
TRAFD1-202ENST00000412615 SOSTDC1Q6X4U4 206 aa8.04□□□□□ -1.12
TRAFD1-202ENST00000412615 CDIP1Q9H305 208 aa8.04□□□□□ -1.12
TRAFD1-202ENST00000412615 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
TRAFD1-202ENST00000412615 INAFM1C9JVW0 142 aa8.04□□□□□ -1.12
TRAFD1-202ENST00000412615 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
TRAFD1-202ENST00000412615 LST1O00453 97 aa8.03□□□□□ -1.12
TRAFD1-202ENST00000412615 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
TRAFD1-202ENST00000412615 NTN5Q8WTR8 489 aaPredicted RBP8.03□□□□□ -1.12
TRAFD1-202ENST00000412615 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
TRAFD1-202ENST00000412615 TOMM7Q9P0U1 55 aa8.03□□□□□ -1.12
TRAFD1-202ENST00000412615 C2CD3Q4AC94 2353 aa8.02□□□□□ -1.12
TRAFD1-202ENST00000412615 FASNP49327 2511 aaKnown RBP8.02□□□□□ -1.12
TRAFD1-202ENST00000412615 A0A087WZ39 114 aa8.02□□□□□ -1.13
TRAFD1-202ENST00000412615 LYRM9A8MSI8 78 aa8.02□□□□□ -1.13
TRAFD1-202ENST00000412615 H3BT86 120 aa8.02□□□□□ -1.13
TRAFD1-202ENST00000412615 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
TRAFD1-202ENST00000412615 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
TRAFD1-202ENST00000412615 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
TRAFD1-202ENST00000412615 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
TRAFD1-202ENST00000412615 COX7A2LO14548 114 aa8□□□□□ -1.13
TRAFD1-202ENST00000412615 APOC4P55056 127 aa8□□□□□ -1.13
TRAFD1-202ENST00000412615 SPATA3Q8NHX4 192 aa8□□□□□ -1.13
TRAFD1-202ENST00000412615 C5orf38Q86SI9 138 aa8□□□□□ -1.13
TRAFD1-202ENST00000412615 PAX4O43316 350 aa7.99□□□□□ -1.13
TRAFD1-202ENST00000412615 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
TRAFD1-202ENST00000412615 SS18Q15532 418 aa7.99□□□□□ -1.13
TRAFD1-202ENST00000412615 UBE2WQ96B02 151 aa7.99□□□□□ -1.13
TRAFD1-202ENST00000412615 TRAV13-2A0A0B4J235 113 aa7.98□□□□□ -1.13
TRAFD1-202ENST00000412615 TEX49A0A1B0GTD5 131 aa7.98□□□□□ -1.13
TRAFD1-202ENST00000412615 LINC00158P58513 81 aa7.98□□□□□ -1.13
TRAFD1-202ENST00000412615 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
TRAFD1-202ENST00000412615 IBA57-AS1B1ANH7 110 aa7.98□□□□□ -1.13
TRAFD1-202ENST00000412615 XGP55808 180 aa7.97□□□□□ -1.13
TRAFD1-202ENST00000412615 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
TRAFD1-202ENST00000412615 A0A096LPF7 62 aa7.96□□□□□ -1.13
TRAFD1-202ENST00000412615 MT-ATP8P03928 68 aa7.96□□□□□ -1.13
TRAFD1-202ENST00000412615 C6orf226Q5I0X4 101 aa7.96□□□□□ -1.13
TRAFD1-202ENST00000412615 CRPP02741 224 aa7.96□□□□□ -1.14
TRAFD1-202ENST00000412615 XCL1P47992 114 aa7.96□□□□□ -1.14
TRAFD1-202ENST00000412615 IGHV4-28A0A0C4DH34 117 aa7.96□□□□□ -1.14
TRAFD1-202ENST00000412615 DAD1P61803 113 aa7.96□□□□□ -1.14
TRAFD1-202ENST00000412615 LINC01561Q8N1V8 128 aa7.96□□□□□ -1.14
TRAFD1-202ENST00000412615 DEFB4AO15263 64 aa7.95□□□□□ -1.14
TRAFD1-202ENST00000412615 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
TRAFD1-202ENST00000412615 MIFP14174 115 aa7.95□□□□□ -1.14
TRAFD1-202ENST00000412615 FN1P02751 2386 aaKnown RBP7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 TRACP01848 142 aa7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 PFN2P35080 140 aa7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 CCL18P55774 89 aa7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 Q8IZM0 81 aa7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 ATP5G1P05496 136 aa7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 WFDC9Q8NEX5 89 aa7.94□□□□□ -1.14
TRAFD1-202ENST00000412615 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
TRAFD1-202ENST00000412615 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
TRAFD1-202ENST00000412615 LINC00337Q8N6G1 96 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms