RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 RPL13AP40429 203 aaKnown RBP4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 Q9UF83 564 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 NIPBLQ6KC79 2804 aaeCLIP4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 A4D1N5 150 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE12HA6NDE8 117 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 F5H768 121 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 TSPEAR-AS2P59090 65 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 CLPSL2Q6UWE3 100 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 CITED1Q99966 193 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 PRO1854Q9UHT4 67 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 TSPAN13O95857 204 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 HTN3P15516 51 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 ERG28Q9UKR5 140 aa4.27□□□□□ -1.73
RAPGEF4-203ENST00000397087 TMEM262E9PQX1 116 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 IGHV3-30-3P0DP02 117 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 DEFB130BP0DP73 79 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 DEFB130AP0DP74 79 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 CITED2Q99967 270 aaPredicted RBP4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 F8P00451 2351 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 UBE2L6O14933 153 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 CRLF1O75462 422 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 SHISA2Q6UWI4 295 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 C2orf82Q6UX34 121 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 IGHV3-33P01772 117 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 CFC1P0CG37 223 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 WFDC10AQ9H1F0 79 aa4.26□□□□□ -1.73
RAPGEF4-203ENST00000397087 ITPR2Q14571 2701 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 MUSTN1Q8IVN3 82 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 OR13C6PQ8NH95 151 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 BAHCC1Q9P281 2608 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE7O76087 117 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 Q6ZSN1 163 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 FAM240AA0A1B0GVK7 77 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 H3BT86 120 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 FHL2Q14192 279 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 TMEM243Q9BU79 118 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 NDUFA12Q9UI09 145 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 AKAP9Q99996 3911 aa4.25□□□□□ -1.73
RAPGEF4-203ENST00000397087 A0A1B0GX51 115 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 CXCL5P42830 114 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 APOC4P55056 127 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 C3orf56Q8N813 242 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 NTN5Q8WTR8 489 aaPredicted RBP4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 MIFP14174 115 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 COX17Q14061 63 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 TMEM101Q96IK0 257 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 SETXQ7Z333 2677 aaKnown RBP4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 DEFB4AO15263 64 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 TCL1BO95988 128 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 CKS1BP61024 79 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 CIRBPQ14011 172 aaKnown RBP4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 LINC00242Q5T6M2 205 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 CLEC2BQ92478 149 aa4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 ANK3Q12955 4377 aaKnown RBP4.24□□□□□ -1.73
RAPGEF4-203ENST00000397087 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 PFN2P35080 140 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 TRGV4A0A0C4DH28 118 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 H3BQ85 93 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 COX6CP09669 75 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 GAGE6Q13070 117 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 Q6ZUT4 128 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 PRIMA1Q86XR5 153 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 A0A087WZ39 114 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 TRBV6-8A0A0A6YYG3 113 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 FAM229AH3BQW9 127 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 ATXN8Q156A1 80 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 X6R8D5 127 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 KMT2BQ9UMN6 2715 aaPredicted RBP4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 IBA57-AS1B1ANH7 110 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 SLC25A20O43772 301 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 LY6G6DO95868 133 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 ANKRD29Q8N6D5 301 aa4.23□□□□□ -1.73
RAPGEF4-203ENST00000397087 EGFEM1PQ0D2K5 195 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 SNCGO76070 127 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 NDUFC2O95298 119 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 PPDPFLQ8WWR9 84 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 TRACP01848 142 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 KRTAP10-3P60369 221 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 TTC32Q5I0X7 151 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 Q8IZM0 81 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 Q9H8V8 135 aa4.22□□□□□ -1.73
RAPGEF4-203ENST00000397087 LINC00158P58513 81 aa4.21□□□□□ -1.74
RAPGEF4-203ENST00000397087 Q6Q795 121 aa4.21□□□□□ -1.74
RAPGEF4-203ENST00000397087 MAST4O15021 2626 aa4.21□□□□□ -1.74
RAPGEF4-203ENST00000397087 GVQW2A0A096LPI5 108 aaPredicted RBP4.21□□□□□ -1.74
RAPGEF4-203ENST00000397087 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
RAPGEF4-203ENST00000397087 EIF4EBP3O60516 100 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms