RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 COX6CP09669 75 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 GAGE6Q13070 117 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 ZFAND6Q6FIF0 208 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 FAM110AQ9BQ89 295 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.69□□□□□ -1.34
NDE1-201ENST00000396354 INSP01308 110 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 PFN2P35080 140 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 GAGE2BQ13066 116 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 GAGE2EQ4V326 116 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 C15orf53Q8NAA6 179 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 Q9HAA7 133 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 GAGE2DQ9UEU5 116 aa6.69□□□□□ -1.34
NDE1-201ENST00000396354 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
NDE1-201ENST00000396354 UBE2WQ96B02 151 aa6.68□□□□□ -1.34
NDE1-201ENST00000396354 TMEM101Q96IK0 257 aa6.68□□□□□ -1.34
NDE1-201ENST00000396354 UBE2L6O14933 153 aa6.68□□□□□ -1.34
NDE1-201ENST00000396354 DEFB4AO15263 64 aa6.67□□□□□ -1.34
NDE1-201ENST00000396354 PEMTQ9UBM1 199 aa6.67□□□□□ -1.34
NDE1-201ENST00000396354 H7C423 109 aa6.67□□□□□ -1.34
NDE1-201ENST00000396354 ODF3L2Q3SX64 289 aa6.67□□□□□ -1.34
NDE1-201ENST00000396354 LY6G6DO95868 133 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
NDE1-201ENST00000396354 MRPS36P82909 103 aaKnown RBP6.66□□□□□ -1.34
NDE1-201ENST00000396354 DEFB114Q30KQ6 69 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 C5orf38Q86SI9 138 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 LITAFQ99732 161 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 CITED2Q99967 270 aaPredicted RBP6.66□□□□□ -1.34
NDE1-201ENST00000396354 TMEM262E9PQX1 116 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 CIRBPQ14011 172 aaKnown RBP6.66□□□□□ -1.34
NDE1-201ENST00000396354 MIAQ16674 131 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
NDE1-201ENST00000396354 OR13C6PQ8NH95 151 aa6.65□□□□□ -1.34
NDE1-201ENST00000396354 C4orf3Q8WVX3 66 aa6.65□□□□□ -1.34
NDE1-201ENST00000396354 TRGV4A0A0C4DH28 118 aa6.65□□□□□ -1.34
NDE1-201ENST00000396354 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
NDE1-201ENST00000396354 ODF3Q96PU9 254 aa6.65□□□□□ -1.34
NDE1-201ENST00000396354 CITED1Q99966 193 aa6.65□□□□□ -1.34
NDE1-201ENST00000396354 ANK2Q01484 3957 aa6.65□□□□□ -1.35
NDE1-201ENST00000396354 A0A0B4J2C4 111 aa6.65□□□□□ -1.35
NDE1-201ENST00000396354 RPL36AP83881 106 aaKnown RBP6.65□□□□□ -1.35
NDE1-201ENST00000396354 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.35
NDE1-201ENST00000396354 RPL36ALQ969Q0 106 aaKnown RBP6.65□□□□□ -1.35
NDE1-201ENST00000396354 NBEAL1Q6ZS30 2694 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 LINC00158P58513 81 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 C1orf158Q8N1D5 194 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 NOTCH1P46531 2555 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 ATP5G1P05496 136 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 C11orf72Q8NBR9 251 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
NDE1-201ENST00000396354 CCL24O00175 119 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 SOSTDC1Q6X4U4 206 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 TRBV10-2A0A0K0K1G8 114 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 LINC00308Q8TCZ7 52 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 A8MTW9 85 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
NDE1-201ENST00000396354 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
NDE1-201ENST00000396354 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
NDE1-201ENST00000396354 XCL1P47992 114 aa6.62□□□□□ -1.35
NDE1-201ENST00000396354 CMYA5Q8N3K9 4069 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 SLPIP03973 132 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 K7EQD1 137 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 LINC01006Q8NI28 216 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
NDE1-201ENST00000396354 FBN1P35555 2871 aaKnown RBP6.6□□□□□ -1.35
NDE1-201ENST00000396354 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
NDE1-201ENST00000396354 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
NDE1-201ENST00000396354 SMIM1B2RUZ4 78 aa6.6□□□□□ -1.35
NDE1-201ENST00000396354 PAX4O43316 350 aa6.6□□□□□ -1.35
NDE1-201ENST00000396354 NHLRC4P0CG21 123 aaPredicted RBP6.6□□□□□ -1.35
NDE1-201ENST00000396354 HTN3P15516 51 aa6.6□□□□□ -1.35
NDE1-201ENST00000396354 NDUFV3P56181 108 aaKnown RBP6.6□□□□□ -1.35
NDE1-201ENST00000396354 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
NDE1-201ENST00000396354 IFITM1P13164 125 aa6.59□□□□□ -1.35
NDE1-201ENST00000396354 HERVK_113P63121 156 aa6.59□□□□□ -1.35
NDE1-201ENST00000396354 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
NDE1-201ENST00000396354 FAM218AQ96MZ4 157 aa6.59□□□□□ -1.35
NDE1-201ENST00000396354 KRTAP10-3P60369 221 aa6.59□□□□□ -1.36
NDE1-201ENST00000396354 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.36
NDE1-201ENST00000396354 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.36
NDE1-201ENST00000396354 TMEM86BQ8N661 226 aa6.59□□□□□ -1.36
NDE1-201ENST00000396354 SPATA3Q8NHX4 192 aa6.59□□□□□ -1.36
NDE1-201ENST00000396354 TMEM243Q9BU79 118 aa6.59□□□□□ -1.36
NDE1-201ENST00000396354 DAZ3Q9NR90 486 aaKnown RBP6.59□□□□□ -1.36
NDE1-201ENST00000396354 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
NDE1-201ENST00000396354 Q8N3U1 123 aa6.58□□□□□ -1.36
NDE1-201ENST00000396354 LST1O00453 97 aa6.58□□□□□ -1.36
NDE1-201ENST00000396354 NDUFA1O15239 70 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 SBSPONQ8IVN8 264 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 STAB1Q9NY15 2570 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 GIG44P09565 113 aaPredicted RBP6.57□□□□□ -1.36
NDE1-201ENST00000396354 LINC00482Q8N8I6 264 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
NDE1-201ENST00000396354 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms