RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 NUPR2A6NF83 97 aa6.2□□□□□ -1.42
CCR9-203ENST00000395963 H7C423 109 aa6.2□□□□□ -1.42
CCR9-203ENST00000395963 A0A1B0GX51 115 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 F5H768 121 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 F8VRH5 84 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 PAPPA-AS1Q5QFB9 102 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 Q6ZTC4 211 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 MAPKAPK5-AS1Q8N8E1 139 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 IGLV2-18A0A075B6J9 118 aa6.19□□□□□ -1.42
CCR9-203ENST00000395963 NACAE9PAV3 2078 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 TRAV26-2A0A0B4J265 109 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 PSMB2P49721 201 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 NBEAL1Q6ZS30 2694 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 IGHV3-73A0A0B4J1V6 119 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 P0DMU3 169 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 NANOS2P60321 138 aaKnown RBP6.18□□□□□ -1.42
CCR9-203ENST00000395963 SFTA2Q6UW10 78 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 Q6ZSN1 163 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 RPL39LQ96EH5 51 aaKnown RBP6.18□□□□□ -1.42
CCR9-203ENST00000395963 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 PPDPFQ9H3Y8 114 aa6.18□□□□□ -1.42
CCR9-203ENST00000395963 KLK5Q9Y337 293 aaPredicted RBP6.18□□□□□ -1.42
CCR9-203ENST00000395963 SMKR1H3BMG3 65 aa6.17□□□□□ -1.42
CCR9-203ENST00000395963 GYPEP15421 78 aa6.17□□□□□ -1.42
CCR9-203ENST00000395963 ANKRD29Q8N6D5 301 aa6.17□□□□□ -1.42
CCR9-203ENST00000395963 ZNRF2Q8NHG8 242 aa6.17□□□□□ -1.42
CCR9-203ENST00000395963 TRBV7-7A0A0K0K1E9 115 aa6.17□□□□□ -1.42
CCR9-203ENST00000395963 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
CCR9-203ENST00000395963 LAGE3Q14657 143 aa6.17□□□□□ -1.42
CCR9-203ENST00000395963 MEIG1Q5JSS6 88 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 C10orf126Q8N4M7 172 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 CHCHD7Q9BUK0 85 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 MRPL35Q9NZE8 188 aaKnown RBP6.16□□□□□ -1.42
CCR9-203ENST00000395963 LOC107984156A0A0G2JMH3 177 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 SLC25A20O43772 301 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 CEMP1Q6PRD7 247 aaPredicted RBP6.16□□□□□ -1.42
CCR9-203ENST00000395963 ARL17AQ8IVW1 177 aa6.16□□□□□ -1.42
CCR9-203ENST00000395963 HERVK_113P61574 105 aa6.15□□□□□ -1.42
CCR9-203ENST00000395963 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.42
CCR9-203ENST00000395963 NOTCH1P46531 2555 aa6.15□□□□□ -1.43
CCR9-203ENST00000395963 TRAV8-4A0A0B4J246 113 aa6.15□□□□□ -1.43
CCR9-203ENST00000395963 J3KT08 172 aa6.15□□□□□ -1.43
CCR9-203ENST00000395963 TSHBP01222 138 aa6.15□□□□□ -1.43
CCR9-203ENST00000395963 ACYP1P07311 99 aa6.15□□□□□ -1.43
CCR9-203ENST00000395963 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.43
CCR9-203ENST00000395963 A0A096LPF7 62 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 TCL1BO95988 128 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 HTN3P15516 51 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 LELP1Q5T871 98 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 PYGO1Q9Y3Y4 419 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 TRBV6-8A0A0A6YYG3 113 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 SRSF9Q13242 221 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCR9-203ENST00000395963 ATXN8Q156A1 80 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 OR13C6PQ8NH95 151 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
CCR9-203ENST00000395963 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 H3BT86 120 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 C20orf203Q8NBC4 194 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 TOMM6Q96B49 74 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 TMEM141Q96I45 108 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 TIMM17AQ99595 171 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 TMEM243Q9BU79 118 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 DNAH9Q9NYC9 4486 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 TMEM170BQ5T4T1 132 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 SCGB1D4Q6XE38 83 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
CCR9-203ENST00000395963 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
CCR9-203ENST00000395963 C3orf84H3BNL1 204 aa6.12□□□□□ -1.43
CCR9-203ENST00000395963 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.11□□□□□ -1.43
CCR9-203ENST00000395963 A0A0J9YY99 117 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 UQCRQO14949 82 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 MRPS36P82909 103 aaKnown RBP6.11□□□□□ -1.43
CCR9-203ENST00000395963 TRBV10-2A0A0K0K1G8 114 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 LOC100131303A0A0U1RQF7 123 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 CCL18P55774 89 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 UBE2WQ96B02 151 aa6.11□□□□□ -1.43
CCR9-203ENST00000395963 UBE2L6O14933 153 aa6.1□□□□□ -1.43
CCR9-203ENST00000395963 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
CCR9-203ENST00000395963 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
CCR9-203ENST00000395963 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
CCR9-203ENST00000395963 C9JAW5 83 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 NTM-AS1Q6ZSK4 140 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 LINC00526Q96FQ7 95 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 APLNQ9ULZ1 77 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 TRBV30A0A0K0K1B3 111 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 LINC01620Q4KN68 170 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 C3orf22Q8N5N4 141 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 Q9UF83 564 aa6.09□□□□□ -1.43
CCR9-203ENST00000395963 IGHV3-30P01768 117 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 IGHV3-30-5P0DP03 117 aa6.08□□□□□ -1.44
CCR9-203ENST00000395963 CXCL5P42830 114 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms