RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 TRACP01848 142 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 XCL2Q9UBD3 114 aa7.22□□□□□ -1.25
PSEN1-204ENST00000394164 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.25
PSEN1-204ENST00000394164 A0A1B0GX51 115 aa7.21□□□□□ -1.25
PSEN1-204ENST00000394164 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.25
PSEN1-204ENST00000394164 RBMY1BA6NDE4 496 aaKnown RBP7.21□□□□□ -1.25
PSEN1-204ENST00000394164 RBMY1EA6NEQ0 496 aaKnown RBP7.21□□□□□ -1.25
PSEN1-204ENST00000394164 RBMY1DP0C7P1 496 aaKnown RBP7.21□□□□□ -1.25
PSEN1-204ENST00000394164 LINC01600Q96MT4 127 aa7.21□□□□□ -1.25
PSEN1-204ENST00000394164 IMUPQ9GZP8 106 aa7.21□□□□□ -1.25
PSEN1-204ENST00000394164 OXTP01178 125 aa7.21□□□□□ -1.26
PSEN1-204ENST00000394164 C2orf48Q96LS8 159 aa7.21□□□□□ -1.26
PSEN1-204ENST00000394164 SPANXDQ9BXN6 97 aa7.21□□□□□ -1.26
PSEN1-204ENST00000394164 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
PSEN1-204ENST00000394164 VSIG2Q96IQ7 327 aa7.2□□□□□ -1.26
PSEN1-204ENST00000394164 ACYP1P07311 99 aa7.2□□□□□ -1.26
PSEN1-204ENST00000394164 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
PSEN1-204ENST00000394164 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
PSEN1-204ENST00000394164 FAM218AQ96MZ4 157 aa7.2□□□□□ -1.26
PSEN1-204ENST00000394164 Q6ZSN1 163 aa7.19□□□□□ -1.26
PSEN1-204ENST00000394164 PEMTQ9UBM1 199 aa7.19□□□□□ -1.26
PSEN1-204ENST00000394164 TRAV25A0A0B4J276 109 aa7.19□□□□□ -1.26
PSEN1-204ENST00000394164 FSHBP01225 129 aa7.19□□□□□ -1.26
PSEN1-204ENST00000394164 IGHV3-53P01767 116 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 COX7A2LO14548 114 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 DPH3Q96FX2 82 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 Q9H8V8 135 aa7.18□□□□□ -1.26
PSEN1-204ENST00000394164 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
PSEN1-204ENST00000394164 MAP6D1Q9H9H5 199 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 C14orf132Q9NPU4 83 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 ESM1Q9NQ30 184 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 DNAJC9-AS1A6NH13 148 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
PSEN1-204ENST00000394164 C5orf38Q86SI9 138 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 KRTAP1-3Q8IUG1 177 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 LINC00308Q8TCZ7 52 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 WFDC10AQ9H1F0 79 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 PDZD2O15018 2839 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 F5H768 121 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 CRYGAP11844 174 aa7.17□□□□□ -1.26
PSEN1-204ENST00000394164 TMEM89A2RUT3 159 aa7.16□□□□□ -1.26
PSEN1-204ENST00000394164 ATOX1O00244 68 aa7.16□□□□□ -1.26
PSEN1-204ENST00000394164 PIK3CD-AS1Q5SR53 167 aa7.16□□□□□ -1.26
PSEN1-204ENST00000394164 SOSTDC1Q6X4U4 206 aa7.16□□□□□ -1.26
PSEN1-204ENST00000394164 C22orf24Q9Y442 160 aa7.16□□□□□ -1.26
PSEN1-204ENST00000394164 VWFP04275 2813 aa7.16□□□□□ -1.26
PSEN1-204ENST00000394164 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-204ENST00000394164 DNAL4O96015 105 aa7.15□□□□□ -1.26
PSEN1-204ENST00000394164 DEFB114Q30KQ6 69 aa7.15□□□□□ -1.26
PSEN1-204ENST00000394164 WFDC9Q8NEX5 89 aa7.15□□□□□ -1.26
PSEN1-204ENST00000394164 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.27
PSEN1-204ENST00000394164 COX6A2Q02221 97 aa7.15□□□□□ -1.27
PSEN1-204ENST00000394164 SMR3AQ99954 134 aa7.15□□□□□ -1.27
PSEN1-204ENST00000394164 RPL18AQ02543 176 aaKnown RBP7.14□□□□□ -1.27
PSEN1-204ENST00000394164 CIRBPQ14011 172 aaKnown RBP7.14□□□□□ -1.27
PSEN1-204ENST00000394164 C4orf3Q8WVX3 66 aa7.14□□□□□ -1.27
PSEN1-204ENST00000394164 TINCRA0A1B0GVN0 87 aa7.14□□□□□ -1.27
PSEN1-204ENST00000394164 PLA2G2AP14555 144 aa7.14□□□□□ -1.27
PSEN1-204ENST00000394164 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
PSEN1-204ENST00000394164 TRGV1A0A0A0MS02 117 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 ATP5G1P05496 136 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
PSEN1-204ENST00000394164 MALP21145 153 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 CXCL5P42830 114 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 HILS1P60008 231 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 ODF3L2Q3SX64 289 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 PRIMA1Q86XR5 153 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 STHQ8IWL8 128 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 ATRQ13535 2644 aa7.13□□□□□ -1.27
PSEN1-204ENST00000394164 CCL24O00175 119 aa7.12□□□□□ -1.27
PSEN1-204ENST00000394164 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
PSEN1-204ENST00000394164 LINC00846Q9NV44 126 aa7.12□□□□□ -1.27
PSEN1-204ENST00000394164 SLPIP03973 132 aa7.12□□□□□ -1.27
PSEN1-204ENST00000394164 BEAN1Q3B7T3 259 aa7.12□□□□□ -1.27
PSEN1-204ENST00000394164 NCR3O14931 201 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 A0A087WYN8 130 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 INAFM2P0DMQ5 153 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
PSEN1-204ENST00000394164 ZNF415Q09FC8 603 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 UBE2D4Q9Y2X8 147 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 OTOGQ6ZRI0 2925 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 USP17L23D6RBM5 183 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 INSP01308 110 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 TMEM258P61165 79 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 Q5XG85 94 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 TENM1Q9UKZ4 2725 aa7.11□□□□□ -1.27
PSEN1-204ENST00000394164 NDUFA1O15239 70 aa7.1□□□□□ -1.27
PSEN1-204ENST00000394164 TRAV23DV6A0A075B6W5 121 aa7.1□□□□□ -1.27
PSEN1-204ENST00000394164 FHL2Q14192 279 aa7.1□□□□□ -1.27
PSEN1-204ENST00000394164 Q6ZTI0 123 aa7.1□□□□□ -1.27
PSEN1-204ENST00000394164 CHCHD7Q9BUK0 85 aa7.1□□□□□ -1.27
PSEN1-204ENST00000394164 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
PSEN1-204ENST00000394164 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
PSEN1-204ENST00000394164 UPK3BQ9BT76 320 aa7.09□□□□□ -1.27
PSEN1-204ENST00000394164 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms