RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CCDC179H3BU77 68 aa9.59□□□□□ -0.87
LCA5-202ENST00000392959 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
LCA5-202ENST00000392959 MRGPRG-AS1Q2M3A8 158 aa9.59□□□□□ -0.87
LCA5-202ENST00000392959 SVIPQ8NHG7 77 aa9.59□□□□□ -0.87
LCA5-202ENST00000392959 WFDC10AQ9H1F0 79 aa9.59□□□□□ -0.87
LCA5-202ENST00000392959 MUC22E2RYF6 1773 aaPredicted RBP9.58□□□□□ -0.88
LCA5-202ENST00000392959 SPTSSBQ8NFR3 76 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 A0A087WZ39 114 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 UBE2D3P61077 147 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 UBE2D2P62837 147 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 ANKRD11Q6UB99 2663 aaPredicted RBP9.58□□□□□ -0.88
LCA5-202ENST00000392959 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
LCA5-202ENST00000392959 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 LINC01006Q8NI28 216 aa9.58□□□□□ -0.88
LCA5-202ENST00000392959 NDUFC1O43677 76 aa9.57□□□□□ -0.88
LCA5-202ENST00000392959 HILS1P60008 231 aa9.57□□□□□ -0.88
LCA5-202ENST00000392959 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
LCA5-202ENST00000392959 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
LCA5-202ENST00000392959 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
LCA5-202ENST00000392959 A0A096LNJ9 63 aa9.56□□□□□ -0.88
LCA5-202ENST00000392959 M0R378 163 aa9.56□□□□□ -0.88
LCA5-202ENST00000392959 CEP192Q8TEP8 1941 aa9.56□□□□□ -0.88
LCA5-202ENST00000392959 ZNF462Q96JM2 2506 aa9.56□□□□□ -0.88
LCA5-202ENST00000392959 LELP1Q5T871 98 aa9.56□□□□□ -0.88
LCA5-202ENST00000392959 Q6Q795 121 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 IGLV4-69A0A075B6H9 119 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 INAFM1C9JVW0 142 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 Q8IZM0 81 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 SEC61GP60059 68 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 WFDC10BQ8IUB3 73 aa9.55□□□□□ -0.88
LCA5-202ENST00000392959 COX17Q14061 63 aa9.54□□□□□ -0.88
LCA5-202ENST00000392959 CDSNQ15517 529 aa9.54□□□□□ -0.88
LCA5-202ENST00000392959 Q6JHZ5 121 aa9.54□□□□□ -0.88
LCA5-202ENST00000392959 ATP5EP56381 51 aaPredicted RBP9.53□□□□□ -0.88
LCA5-202ENST00000392959 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
LCA5-202ENST00000392959 KPRPQ5T749 579 aaPredicted RBP9.53□□□□□ -0.88
LCA5-202ENST00000392959 IL17DQ8TAD2 202 aa9.53□□□□□ -0.88
LCA5-202ENST00000392959 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
LCA5-202ENST00000392959 TSPEAR-AS2P59090 65 aa9.53□□□□□ -0.88
LCA5-202ENST00000392959 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
LCA5-202ENST00000392959 AVPP01185 164 aa9.53□□□□□ -0.88
LCA5-202ENST00000392959 MUC7Q8TAX7 377 aa9.53□□□□□ -0.88
LCA5-202ENST00000392959 DHRS4-AS1Q9P1J3 65 aa9.53□□□□□ -0.88
LCA5-202ENST00000392959 CRIP2P52943 208 aaPredicted RBP9.52□□□□□ -0.89
LCA5-202ENST00000392959 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
LCA5-202ENST00000392959 KIR2DL5BQ8NHK3 375 aa9.52□□□□□ -0.89
LCA5-202ENST00000392959 CENPFP49454 3210 aa9.52□□□□□ -0.89
LCA5-202ENST00000392959 EDN2P20800 178 aa9.52□□□□□ -0.89
LCA5-202ENST00000392959 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.52□□□□□ -0.89
LCA5-202ENST00000392959 NTM-AS1Q6ZSK4 140 aa9.51□□□□□ -0.89
LCA5-202ENST00000392959 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
LCA5-202ENST00000392959 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.51□□□□□ -0.89
LCA5-202ENST00000392959 CYSRT1A8MQ03 144 aa9.5□□□□□ -0.89
LCA5-202ENST00000392959 WFDC13Q8IUB5 93 aa9.5□□□□□ -0.89
LCA5-202ENST00000392959 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
LCA5-202ENST00000392959 MTORP42345 2549 aa9.5□□□□□ -0.89
LCA5-202ENST00000392959 CASC2Q6XLA1 102 aa9.5□□□□□ -0.89
LCA5-202ENST00000392959 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
LCA5-202ENST00000392959 TRAV10A0A0B4J240 114 aa9.49□□□□□ -0.89
LCA5-202ENST00000392959 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
LCA5-202ENST00000392959 IGLV2-18A0A075B6J9 118 aa9.49□□□□□ -0.89
LCA5-202ENST00000392959 LRRK2Q5S007 2527 aa9.49□□□□□ -0.89
LCA5-202ENST00000392959 LRP4O75096 1905 aa9.48□□□□□ -0.89
LCA5-202ENST00000392959 V9GYY9 64 aa9.48□□□□□ -0.89
LCA5-202ENST00000392959 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
LCA5-202ENST00000392959 AMELXQ99217 191 aa9.48□□□□□ -0.89
LCA5-202ENST00000392959 PPDPFQ9H3Y8 114 aa9.48□□□□□ -0.89
LCA5-202ENST00000392959 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
LCA5-202ENST00000392959 UNQ6190/PRO20217Q6UXQ8 127 aa9.47□□□□□ -0.89
LCA5-202ENST00000392959 PRR4Q16378 134 aa9.47□□□□□ -0.89
LCA5-202ENST00000392959 ZNF580Q9UK33 172 aa9.47□□□□□ -0.89
LCA5-202ENST00000392959 AGRNO00468 2067 aa9.47□□□□□ -0.89
LCA5-202ENST00000392959 CHD8Q9HCK8 2581 aa9.46□□□□□ -0.89
LCA5-202ENST00000392959 LINC00694P0DN24 101 aa9.46□□□□□ -0.89
LCA5-202ENST00000392959 COX6A2Q02221 97 aa9.46□□□□□ -0.89
LCA5-202ENST00000392959 PTPRSQ13332 1948 aa9.46□□□□□ -0.9
LCA5-202ENST00000392959 SPTBN4Q9H254 2564 aa9.46□□□□□ -0.9
LCA5-202ENST00000392959 LRCOL1A6NCL2 159 aa9.46□□□□□ -0.9
LCA5-202ENST00000392959 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
LCA5-202ENST00000392959 ZNF843Q8N446 348 aa9.45□□□□□ -0.9
LCA5-202ENST00000392959 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
LCA5-202ENST00000392959 MRPL55Q7Z7F7 128 aaKnown RBP9.45□□□□□ -0.9
LCA5-202ENST00000392959 Q8N814 137 aa9.45□□□□□ -0.9
LCA5-202ENST00000392959 A0A087WVE0 104 aa9.44□□□□□ -0.9
LCA5-202ENST00000392959 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
LCA5-202ENST00000392959 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
LCA5-202ENST00000392959 BRI3O95415 125 aa9.44□□□□□ -0.9
LCA5-202ENST00000392959 LY6G6DO95868 133 aa9.43□□□□□ -0.9
LCA5-202ENST00000392959 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
LCA5-202ENST00000392959 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
LCA5-202ENST00000392959 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
LCA5-202ENST00000392959 EGFEM1PQ0D2K5 195 aa9.43□□□□□ -0.9
LCA5-202ENST00000392959 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
LCA5-202ENST00000392959 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
LCA5-202ENST00000392959 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms