RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 TRACP01848 142 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 NCR3O14931 201 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 IGHV4-28A0A0C4DH34 117 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 COX7BP24311 80 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 C9orf85Q96MD7 179 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 CDKN2A-AS1Q9UH64 79 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 RNASE3P12724 160 aaKnown RBP9.56□□□□□ -0.88
PTPRN2-203ENST00000389418 TNRC6BQ9UPQ9 1833 aaKnown RBP9.55□□□□□ -0.88
PTPRN2-203ENST00000389418 LOC100131303A0A0U1RQF7 123 aa9.55□□□□□ -0.88
PTPRN2-203ENST00000389418 B9D2Q9BPU9 175 aa9.55□□□□□ -0.88
PTPRN2-203ENST00000389418 FREM2Q5SZK8 3169 aa9.55□□□□□ -0.88
PTPRN2-203ENST00000389418 NREPQ16612 68 aa9.55□□□□□ -0.88
PTPRN2-203ENST00000389418 RETNQ9HD89 108 aa9.55□□□□□ -0.88
PTPRN2-203ENST00000389418 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
PTPRN2-203ENST00000389418 CNFNQ9BYD5 112 aa9.54□□□□□ -0.88
PTPRN2-203ENST00000389418 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
PTPRN2-203ENST00000389418 REV3LO60673 3130 aa9.54□□□□□ -0.88
PTPRN2-203ENST00000389418 CHD6Q8TD26 2715 aa9.54□□□□□ -0.88
PTPRN2-203ENST00000389418 RBM3P98179 157 aaKnown RBP9.54□□□□□ -0.88
PTPRN2-203ENST00000389418 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
PTPRN2-203ENST00000389418 LELP1Q5T871 98 aa9.53□□□□□ -0.88
PTPRN2-203ENST00000389418 TMEM223A0PJW6 202 aa9.53□□□□□ -0.88
PTPRN2-203ENST00000389418 GAS8-AS1O95177 125 aa9.53□□□□□ -0.88
PTPRN2-203ENST00000389418 RBX1P62877 108 aa9.52□□□□□ -0.89
PTPRN2-203ENST00000389418 MRPS36P82909 103 aaKnown RBP9.52□□□□□ -0.89
PTPRN2-203ENST00000389418 SPANXB1Q9NS25 103 aaPredicted RBP9.52□□□□□ -0.89
PTPRN2-203ENST00000389418 B5MCH6 92 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 MUC7Q8TAX7 377 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 IGLV1-51P01701 117 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 CD164L2Q6UWJ8 174 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 A0A096LNI7 61 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 MRPS12O15235 138 aaKnown RBP9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 POLR2KP53803 58 aaKnown RBP9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 NRACQ8N912 160 aa9.51□□□□□ -0.89
PTPRN2-203ENST00000389418 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
PTPRN2-203ENST00000389418 SYCNQ0VAF6 134 aa9.5□□□□□ -0.89
PTPRN2-203ENST00000389418 KPRPQ5T749 579 aaPredicted RBP9.5□□□□□ -0.89
PTPRN2-203ENST00000389418 NDUFS5O43920 106 aa9.5□□□□□ -0.89
PTPRN2-203ENST00000389418 TIMM17BO60830 172 aa9.5□□□□□ -0.89
PTPRN2-203ENST00000389418 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
PTPRN2-203ENST00000389418 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
PTPRN2-203ENST00000389418 MAPKAPK5-AS1Q8N8E1 139 aa9.49□□□□□ -0.89
PTPRN2-203ENST00000389418 G3V4G9 280 aa9.49□□□□□ -0.89
PTPRN2-203ENST00000389418 PTH2Q96A98 100 aa9.49□□□□□ -0.89
PTPRN2-203ENST00000389418 XAGE1AQ9HD64 81 aa9.49□□□□□ -0.89
PTPRN2-203ENST00000389418 A8MZ25 164 aa9.48□□□□□ -0.89
PTPRN2-203ENST00000389418 TSHBP01222 138 aa9.48□□□□□ -0.89
PTPRN2-203ENST00000389418 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
PTPRN2-203ENST00000389418 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
PTPRN2-203ENST00000389418 SS18L2Q9UHA2 77 aa9.48□□□□□ -0.89
PTPRN2-203ENST00000389418 NANOS2P60321 138 aaKnown RBP9.48□□□□□ -0.89
PTPRN2-203ENST00000389418 COL6A3P12111 3177 aa9.47□□□□□ -0.89
PTPRN2-203ENST00000389418 CLUHP3Q96NS8 147 aa9.47□□□□□ -0.89
PTPRN2-203ENST00000389418 MP68P56378 58 aa9.47□□□□□ -0.89
PTPRN2-203ENST00000389418 BAHCC1Q9P281 2608 aa9.47□□□□□ -0.89
PTPRN2-203ENST00000389418 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
PTPRN2-203ENST00000389418 LINC00310P59036 64 aa9.46□□□□□ -0.89
PTPRN2-203ENST00000389418 SMIM20Q8N5G0 67 aa9.46□□□□□ -0.89
PTPRN2-203ENST00000389418 COX8CQ7Z4L0 72 aa9.46□□□□□ -0.89
PTPRN2-203ENST00000389418 UBE2D3P61077 147 aa9.46□□□□□ -0.9
PTPRN2-203ENST00000389418 UBE2D2P62837 147 aa9.46□□□□□ -0.9
PTPRN2-203ENST00000389418 A0A1B0GX51 115 aa9.45□□□□□ -0.9
PTPRN2-203ENST00000389418 ATOX1O00244 68 aa9.45□□□□□ -0.9
PTPRN2-203ENST00000389418 A0A0J9YWU9 116 aa9.45□□□□□ -0.9
PTPRN2-203ENST00000389418 FOXI1Q12951 378 aa9.45□□□□□ -0.9
PTPRN2-203ENST00000389418 HIGD2AQ9BW72 106 aa9.44□□□□□ -0.9
PTPRN2-203ENST00000389418 UBE2D4Q9Y2X8 147 aa9.44□□□□□ -0.9
PTPRN2-203ENST00000389418 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
PTPRN2-203ENST00000389418 IGLV4-69A0A075B6H9 119 aa9.43□□□□□ -0.9
PTPRN2-203ENST00000389418 TCL1BO95988 128 aa9.43□□□□□ -0.9
PTPRN2-203ENST00000389418 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
PTPRN2-203ENST00000389418 LY6G6CO95867 125 aa9.43□□□□□ -0.9
PTPRN2-203ENST00000389418 FRYLO94915 3013 aa9.43□□□□□ -0.9
PTPRN2-203ENST00000389418 LAMA1P25391 3075 aa9.42□□□□□ -0.9
PTPRN2-203ENST00000389418 COX17Q14061 63 aa9.42□□□□□ -0.9
PTPRN2-203ENST00000389418 NBEAL1Q6ZS30 2694 aa9.42□□□□□ -0.9
PTPRN2-203ENST00000389418 C7orf33Q8WU49 177 aa9.41□□□□□ -0.9
PTPRN2-203ENST00000389418 PTPRBP23467 1997 aa9.41□□□□□ -0.9
PTPRN2-203ENST00000389418 A0A087WZ39 114 aa9.41□□□□□ -0.9
PTPRN2-203ENST00000389418 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
PTPRN2-203ENST00000389418 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
PTPRN2-203ENST00000389418 BOD1L1Q8NFC6 3051 aa9.41□□□□□ -0.9
PTPRN2-203ENST00000389418 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
PTPRN2-203ENST00000389418 FAM19A1Q7Z5A9 133 aa9.4□□□□□ -0.9
PTPRN2-203ENST00000389418 LINC00643Q86TS7 51 aa9.4□□□□□ -0.9
PTPRN2-203ENST00000389418 NUPR2A6NF83 97 aa9.4□□□□□ -0.91
PTPRN2-203ENST00000389418 UBE2D1P51668 147 aa9.4□□□□□ -0.91
PTPRN2-203ENST00000389418 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.91
PTPRN2-203ENST00000389418 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.91
PTPRN2-203ENST00000389418 Q8IZM0 81 aa9.39□□□□□ -0.91
PTPRN2-203ENST00000389418 M0R378 163 aa9.39□□□□□ -0.91
PTPRN2-203ENST00000389418 C2orf91Q6ZV80 131 aa9.39□□□□□ -0.91
PTPRN2-203ENST00000389418 TACC2O95359 2948 aa9.39□□□□□ -0.91
PTPRN2-203ENST00000389418 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
PTPRN2-203ENST00000389418 TMEM258P61165 79 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms