RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
SCFD2-201ENST00000388940 UBE2L6O14933 153 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 TRAV13-1A0A0B4J241 112 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 F5H768 121 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 TRIAP1O43715 76 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 SLC25A20O43772 301 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 Q9H8V8 135 aa10.58□□□□□ -0.72
SCFD2-201ENST00000388940 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
SCFD2-201ENST00000388940 FHL2Q14192 279 aa10.57□□□□□ -0.72
SCFD2-201ENST00000388940 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
SCFD2-201ENST00000388940 CCDC179H3BU77 68 aa10.57□□□□□ -0.72
SCFD2-201ENST00000388940 CUBNO60494 3623 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 ACANP16112 2415 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 C9JAW5 83 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 TMEM126AQ9H061 195 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 SETXQ7Z333 2677 aaKnown RBP10.56□□□□□ -0.72
SCFD2-201ENST00000388940 HELZ2Q9BYK8 2649 aaKnown RBP10.56□□□□□ -0.72
SCFD2-201ENST00000388940 KRTAP10-3P60369 221 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 LINC01620Q4KN68 170 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 ANKRD29Q8N6D5 301 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 COPS9Q8WXC6 57 aa10.56□□□□□ -0.72
SCFD2-201ENST00000388940 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
SCFD2-201ENST00000388940 NPC2P61916 151 aa10.55□□□□□ -0.72
SCFD2-201ENST00000388940 LINC00482Q8N8I6 264 aa10.55□□□□□ -0.72
SCFD2-201ENST00000388940 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
SCFD2-201ENST00000388940 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
SCFD2-201ENST00000388940 COX6CP09669 75 aa10.54□□□□□ -0.72
SCFD2-201ENST00000388940 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
SCFD2-201ENST00000388940 SNCGO76070 127 aa10.54□□□□□ -0.72
SCFD2-201ENST00000388940 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
SCFD2-201ENST00000388940 DAND5Q8N907 189 aa10.53□□□□□ -0.72
SCFD2-201ENST00000388940 TRBV6-8A0A0A6YYG3 113 aa10.53□□□□□ -0.72
SCFD2-201ENST00000388940 TRBV10-2A0A0K0K1G8 114 aa10.53□□□□□ -0.72
SCFD2-201ENST00000388940 PF4P02776 101 aa10.53□□□□□ -0.72
SCFD2-201ENST00000388940 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
SCFD2-201ENST00000388940 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.73
SCFD2-201ENST00000388940 RPL13AP40429 203 aaKnown RBP10.52□□□□□ -0.73
SCFD2-201ENST00000388940 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.73
SCFD2-201ENST00000388940 SMR3AQ99954 134 aa10.52□□□□□ -0.73
SCFD2-201ENST00000388940 ITPR2Q14571 2701 aa10.51□□□□□ -0.73
SCFD2-201ENST00000388940 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
SCFD2-201ENST00000388940 MTORP42345 2549 aa10.5□□□□□ -0.73
SCFD2-201ENST00000388940 SETD2Q9BYW2 2564 aaPredicted RBP10.5□□□□□ -0.73
SCFD2-201ENST00000388940 SMIM9A6NGZ8 99 aa10.5□□□□□ -0.73
SCFD2-201ENST00000388940 LY6G6DO95868 133 aa10.49□□□□□ -0.73
SCFD2-201ENST00000388940 MEIG1Q5JSS6 88 aa10.49□□□□□ -0.73
SCFD2-201ENST00000388940 LST1O00453 97 aa10.49□□□□□ -0.73
SCFD2-201ENST00000388940 CRLF1O75462 422 aa10.49□□□□□ -0.73
SCFD2-201ENST00000388940 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
SCFD2-201ENST00000388940 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
SCFD2-201ENST00000388940 H3BT86 120 aa10.48□□□□□ -0.73
SCFD2-201ENST00000388940 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
SCFD2-201ENST00000388940 X6R8D5 127 aa10.48□□□□□ -0.73
SCFD2-201ENST00000388940 CHCHD5Q9BSY4 110 aa10.47□□□□□ -0.73
SCFD2-201ENST00000388940 IGHV3OR16-9A0A0B4J2B5 98 aa10.46□□□□□ -0.73
SCFD2-201ENST00000388940 DEFB130BP0DP73 79 aa10.46□□□□□ -0.73
SCFD2-201ENST00000388940 DEFB130AP0DP74 79 aa10.46□□□□□ -0.73
SCFD2-201ENST00000388940 NTN5Q8WTR8 489 aaPredicted RBP10.46□□□□□ -0.73
SCFD2-201ENST00000388940 UNC79Q9P2D8 2635 aa10.46□□□□□ -0.73
SCFD2-201ENST00000388940 A0A0U1RRA0 63 aa10.46□□□□□ -0.74
SCFD2-201ENST00000388940 WIPF1O43516 503 aa10.46□□□□□ -0.74
SCFD2-201ENST00000388940 HIVEP2P31629 2446 aa10.46□□□□□ -0.74
SCFD2-201ENST00000388940 NIPBLQ6KC79 2804 aaeCLIP10.46□□□□□ -0.742e-6■■□□□ 14
SCFD2-201ENST00000388940 C9orf66Q5T8R8 295 aa10.45□□□□□ -0.74
SCFD2-201ENST00000388940 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
SCFD2-201ENST00000388940 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
SCFD2-201ENST00000388940 A0A087WZ39 114 aa10.44□□□□□ -0.74
SCFD2-201ENST00000388940 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
SCFD2-201ENST00000388940 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
SCFD2-201ENST00000388940 COX7A2LO14548 114 aa10.43□□□□□ -0.74
SCFD2-201ENST00000388940 GYPEP15421 78 aa10.43□□□□□ -0.74
SCFD2-201ENST00000388940 PRO0255Q9UI72 69 aa10.43□□□□□ -0.74
SCFD2-201ENST00000388940 C2CD3Q4AC94 2353 aa10.43□□□□□ -0.74
SCFD2-201ENST00000388940 LYRM9A8MSI8 78 aa10.42□□□□□ -0.74
SCFD2-201ENST00000388940 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
SCFD2-201ENST00000388940 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
SCFD2-201ENST00000388940 GCN1Q92616 2671 aaKnown RBP10.41□□□□□ -0.74
SCFD2-201ENST00000388940 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
SCFD2-201ENST00000388940 TEX49A0A1B0GTD5 131 aa10.41□□□□□ -0.74
SCFD2-201ENST00000388940 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
SCFD2-201ENST00000388940 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
SCFD2-201ENST00000388940 TRAV13-2A0A0B4J235 113 aa10.39□□□□□ -0.75
SCFD2-201ENST00000388940 IBA57-AS1B1ANH7 110 aa10.39□□□□□ -0.75
SCFD2-201ENST00000388940 DEFB121Q5J5C9 76 aa10.39□□□□□ -0.75
SCFD2-201ENST00000388940 MIR7-3HGQ8N6C7 128 aa10.39□□□□□ -0.75
SCFD2-201ENST00000388940 LINC01561Q8N1V8 128 aa10.38□□□□□ -0.75
SCFD2-201ENST00000388940 SPATA3Q8NHX4 192 aa10.38□□□□□ -0.75
SCFD2-201ENST00000388940 FASNP49327 2511 aaKnown RBP10.38□□□□□ -0.75
SCFD2-201ENST00000388940 INAFM1C9JVW0 142 aa10.38□□□□□ -0.75
SCFD2-201ENST00000388940 APOC4P55056 127 aa10.37□□□□□ -0.75
SCFD2-201ENST00000388940 SS18Q15532 418 aa10.37□□□□□ -0.75
SCFD2-201ENST00000388940 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
SCFD2-201ENST00000388940 PAX4O43316 350 aa10.37□□□□□ -0.75
SCFD2-201ENST00000388940 TRACP01848 142 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms