RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 UQCRQO14949 82 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 TRIAP1O43715 76 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 IGHV3-30P01768 117 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 IGHV3-30-5P0DP03 117 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 CFAP126Q5VTH2 177 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 C11orf71Q6IPW1 123 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 LINC00467Q9BRT7 94 aa6.26□□□□□ -1.41
VPS36-201ENST00000378060 RNASE3P12724 160 aaKnown RBP6.25□□□□□ -1.41
VPS36-201ENST00000378060 INSL3P51460 131 aa6.25□□□□□ -1.41
VPS36-201ENST00000378060 C11orf21Q9P2W6 132 aa6.25□□□□□ -1.41
VPS36-201ENST00000378060 IBA57-AS1B1ANH7 110 aa6.25□□□□□ -1.41
VPS36-201ENST00000378060 ANKRD17O75179 2603 aaKnown RBP6.25□□□□□ -1.41
VPS36-201ENST00000378060 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
VPS36-201ENST00000378060 KLLNB2CW77 178 aa6.25□□□□□ -1.41
VPS36-201ENST00000378060 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
VPS36-201ENST00000378060 Q9HAA7 133 aa6.25□□□□□ -1.41
VPS36-201ENST00000378060 DEFB105AQ8NG35 78 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 IMUPQ9GZP8 106 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 UBE2BP63146 152 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 DEFB114Q30KQ6 69 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 Q6ZTI0 123 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 COX8CQ7Z4L0 72 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 C14orf132Q9NPU4 83 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
VPS36-201ENST00000378060 UFSP1Q6NVU6 142 aa6.24□□□□□ -1.41
VPS36-201ENST00000378060 PDZD2O15018 2839 aa6.23□□□□□ -1.41
VPS36-201ENST00000378060 HIGD2BQ4VC39 106 aa6.23□□□□□ -1.41
VPS36-201ENST00000378060 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
VPS36-201ENST00000378060 PIK3CD-AS1Q5SR53 167 aa6.23□□□□□ -1.41
VPS36-201ENST00000378060 Q6YL49 198 aa6.23□□□□□ -1.41
VPS36-201ENST00000378060 CLPSL1A2RUU4 121 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 SMIM9A6NGZ8 99 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 NCR3O14931 201 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 MRAPQ8TCY5 172 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 CITED2Q99967 270 aaPredicted RBP6.22□□□□□ -1.41
VPS36-201ENST00000378060 KLK12Q9UKR0 248 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 TSHBP01222 138 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 MP68P56378 58 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 KRTAP10-9P60411 292 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 TEX15Q9BXT5 2789 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 TRBV6-4A0A1B0GX49 114 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 LST1O00453 97 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 CCL18P55774 89 aa6.22□□□□□ -1.41
VPS36-201ENST00000378060 BAHCC1Q9P281 2608 aa6.21□□□□□ -1.41
VPS36-201ENST00000378060 CRYGDP07320 174 aa6.21□□□□□ -1.41
VPS36-201ENST00000378060 COX7BP24311 80 aa6.21□□□□□ -1.41
VPS36-201ENST00000378060 MRPS36P82909 103 aaKnown RBP6.21□□□□□ -1.41
VPS36-201ENST00000378060 RPL18AQ02543 176 aaKnown RBP6.21□□□□□ -1.41
VPS36-201ENST00000378060 PRR9Q5T870 116 aa6.21□□□□□ -1.41
VPS36-201ENST00000378060 LRRC75A-AS1Q8N1F1 130 aa6.21□□□□□ -1.42
VPS36-201ENST00000378060 ESM1Q9NQ30 184 aa6.21□□□□□ -1.42
VPS36-201ENST00000378060 CUBNO60494 3623 aa6.21□□□□□ -1.42
VPS36-201ENST00000378060 IGIPA6NJ69 53 aa6.2□□□□□ -1.42
VPS36-201ENST00000378060 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
VPS36-201ENST00000378060 DEFB135Q30KP9 77 aa6.2□□□□□ -1.42
VPS36-201ENST00000378060 SETD2Q9BYW2 2564 aaPredicted RBP6.2□□□□□ -1.42
VPS36-201ENST00000378060 LYRM9A8MSI8 78 aa6.2□□□□□ -1.42
VPS36-201ENST00000378060 NDUFC2O95298 119 aa6.2□□□□□ -1.42
VPS36-201ENST00000378060 NDUFB1O75438 58 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 PSMG3-AS1Q96PY0 264 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 UBE2D1P51668 147 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 C3orf22Q8N5N4 141 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 DNAJC9-AS1A6NH13 148 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 REG3AQ06141 175 aa6.19□□□□□ -1.42
VPS36-201ENST00000378060 RAI1Q7Z5J4 1906 aaPredicted RBP6.19□□□□□ -1.42
VPS36-201ENST00000378060 UPK3BQ9BT76 320 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 MRGPRG-AS1Q2M3A8 158 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 Q6Q795 121 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 Q6ZS46 218 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 DCANP1Q8TF63 244 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 TRAV23DV6A0A075B6W5 121 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 XGP55808 180 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 LINC00269Q8N2A0 174 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
VPS36-201ENST00000378060 FAM240AA0A1B0GVK7 77 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 SDIM1Q6ZPB5 146 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 CHCHD10Q8WYQ3 142 aaPredicted RBP6.17□□□□□ -1.42
VPS36-201ENST00000378060 A0A096LNJ9 63 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 C20orf197Q8N268 126 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 BPY2O14599 106 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 IGHV4-31P0DP07 118 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 PROK1P58294 105 aa6.17□□□□□ -1.42
VPS36-201ENST00000378060 CRIP2P52943 208 aaPredicted RBP6.17□□□□□ -1.42
VPS36-201ENST00000378060 ITPR3Q14573 2671 aa6.16□□□□□ -1.42
VPS36-201ENST00000378060 BRI3O95415 125 aa6.15□□□□□ -1.42
VPS36-201ENST00000378060 DEFB4AO15263 64 aa6.15□□□□□ -1.42
VPS36-201ENST00000378060 UBE2D3P61077 147 aa6.15□□□□□ -1.42
VPS36-201ENST00000378060 UBE2D2P62837 147 aa6.15□□□□□ -1.42
VPS36-201ENST00000378060 SERP2Q8N6R1 65 aa6.15□□□□□ -1.42
VPS36-201ENST00000378060 FLNAP21333 2647 aaKnown RBP6.15□□□□□ -1.43
VPS36-201ENST00000378060 Q6ZSV7 163 aa6.15□□□□□ -1.43
VPS36-201ENST00000378060 WFDC9Q8NEX5 89 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms