RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SMAGPQ0VAQ4 97 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 FHL2Q14192 279 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 OVOL2Q9BRP0 275 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 TMEM243Q9BU79 118 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 FAM110AQ9BQ89 295 aa16.79■□□□□ 0.28
CDK9-201ENST00000373264 CSDC2Q9Y534 153 aaKnown RBP16.79■□□□□ 0.28
CDK9-201ENST00000373264 F5H768 121 aa16.79■□□□□ 0.28
CDK9-201ENST00000373264 UBE2L6O14933 153 aa16.79■□□□□ 0.28
CDK9-201ENST00000373264 PF4P02776 101 aa16.79■□□□□ 0.28
CDK9-201ENST00000373264 NSD1Q96L73 2696 aaPredicted RBP16.78■□□□□ 0.28
CDK9-201ENST00000373264 TEN1Q86WV5 123 aa16.78■□□□□ 0.28
CDK9-201ENST00000373264 IGLV4-60A0A075B6I1 120 aa16.77■□□□□ 0.28
CDK9-201ENST00000373264 SLC25A20O43772 301 aa16.77■□□□□ 0.28
CDK9-201ENST00000373264 CRLF1O75462 422 aa16.77■□□□□ 0.28
CDK9-201ENST00000373264 TRRAPQ9Y4A5 3859 aa16.77■□□□□ 0.28
CDK9-201ENST00000373264 SPATA25Q9BR10 227 aa16.77■□□□□ 0.27
CDK9-201ENST00000373264 TRBV6-4A0A1B0GX49 114 aa16.76■□□□□ 0.27
CDK9-201ENST00000373264 SOSTDC1Q6X4U4 206 aa16.76■□□□□ 0.27
CDK9-201ENST00000373264 LINC00482Q8N8I6 264 aa16.76■□□□□ 0.27
CDK9-201ENST00000373264 ATP6V0E2Q8NHE4 81 aa16.76■□□□□ 0.27
CDK9-201ENST00000373264 ICOSQ9Y6W8 199 aa16.76■□□□□ 0.27
CDK9-201ENST00000373264 SIGMAR1Q99720 223 aa16.75■□□□□ 0.27
CDK9-201ENST00000373264 FAM19A3Q7Z5A8 133 aa16.75■□□□□ 0.27
CDK9-201ENST00000373264 CLEC2BQ92478 149 aa16.75■□□□□ 0.27
CDK9-201ENST00000373264 LINC00308Q8TCZ7 52 aa16.74■□□□□ 0.27
CDK9-201ENST00000373264 TRBV30A0A0K0K1B3 111 aa16.73■□□□□ 0.27
CDK9-201ENST00000373264 RPL13AP40429 203 aaKnown RBP16.73■□□□□ 0.27
CDK9-201ENST00000373264 PRIMA1Q86XR5 153 aa16.73■□□□□ 0.27
CDK9-201ENST00000373264 ATRQ13535 2644 aa16.73■□□□□ 0.27
CDK9-201ENST00000373264 CDIP1Q9H305 208 aa16.73■□□□□ 0.27
CDK9-201ENST00000373264 TIMM17BO60830 172 aa16.72■□□□□ 0.27
CDK9-201ENST00000373264 LINC01620Q4KN68 170 aa16.72■□□□□ 0.27
CDK9-201ENST00000373264 PPDPFLQ8WWR9 84 aa16.72■□□□□ 0.27
CDK9-201ENST00000373264 INAFM1C9JVW0 142 aa16.71■□□□□ 0.27
CDK9-201ENST00000373264 MEIG1Q5JSS6 88 aa16.7■□□□□ 0.26
CDK9-201ENST00000373264 CHCHD5Q9BSY4 110 aa16.7■□□□□ 0.26
CDK9-201ENST00000373264 TRBV6-8A0A0A6YYG3 113 aa16.7■□□□□ 0.26
CDK9-201ENST00000373264 DEFB4AO15263 64 aa16.7■□□□□ 0.26
CDK9-201ENST00000373264 ATXN8Q156A1 80 aa16.7■□□□□ 0.26
CDK9-201ENST00000373264 HIVEP1P15822 2718 aa16.69■□□□□ 0.26
CDK9-201ENST00000373264 A0A096LPF7 62 aa16.69■□□□□ 0.26
CDK9-201ENST00000373264 CIRBPQ14011 172 aaKnown RBP16.69■□□□□ 0.26
CDK9-201ENST00000373264 X6R8D5 127 aa16.68■□□□□ 0.26
CDK9-201ENST00000373264 TOMM7Q9P0U1 55 aa16.67■□□□□ 0.26
CDK9-201ENST00000373264 IFITM1P13164 125 aa16.67■□□□□ 0.26
CDK9-201ENST00000373264 NTN5Q8WTR8 489 aaPredicted RBP16.67■□□□□ 0.26
CDK9-201ENST00000373264 TEX49A0A1B0GTD5 131 aa16.64■□□□□ 0.25
CDK9-201ENST00000373264 GYPEP15421 78 aa16.64■□□□□ 0.25
CDK9-201ENST00000373264 H7C423 109 aa16.62■□□□□ 0.25
CDK9-201ENST00000373264 MT-ATP8P03928 68 aa16.62■□□□□ 0.25
CDK9-201ENST00000373264 C5orf38Q86SI9 138 aa16.62■□□□□ 0.25
CDK9-201ENST00000373264 XGP55808 180 aa16.62■□□□□ 0.25
CDK9-201ENST00000373264 RNF183Q96D59 192 aa16.62■□□□□ 0.25
CDK9-201ENST00000373264 CLPSL2Q6UWE3 100 aa16.61■□□□□ 0.25
CDK9-201ENST00000373264 TEP1Q99973 2627 aaKnown RBP16.61■□□□□ 0.25
CDK9-201ENST00000373264 DEFB135Q30KP9 77 aa16.6■□□□□ 0.25
CDK9-201ENST00000373264 TRBV10-2A0A0K0K1G8 114 aa16.6■□□□□ 0.25
CDK9-201ENST00000373264 COX7B2Q8TF08 81 aa16.6■□□□□ 0.25
CDK9-201ENST00000373264 IGHV3OR16-9A0A0B4J2B5 98 aa16.59■□□□□ 0.25
CDK9-201ENST00000373264 FAM222AQ5U5X8 452 aa16.59■□□□□ 0.25
CDK9-201ENST00000373264 KIR2DL5BQ8NHK3 375 aa16.59■□□□□ 0.25
CDK9-201ENST00000373264 CIDEAO60543 219 aa16.58■□□□□ 0.25
CDK9-201ENST00000373264 LINC00612Q8N6U2 182 aa16.58■□□□□ 0.25
CDK9-201ENST00000373264 COX6CP09669 75 aa16.58■□□□□ 0.24
CDK9-201ENST00000373264 C11orf68Q9H3H3 251 aaKnown RBP16.58■□□□□ 0.24
CDK9-201ENST00000373264 TMEM262E9PQX1 116 aa16.57■□□□□ 0.24
CDK9-201ENST00000373264 LST1O00453 97 aa16.57■□□□□ 0.24
CDK9-201ENST00000373264 C2orf82Q6UX34 121 aa16.57■□□□□ 0.24
CDK9-201ENST00000373264 Q8N3U1 123 aa16.57■□□□□ 0.24
CDK9-201ENST00000373264 MIR7-3HGQ8N6C7 128 aa16.56■□□□□ 0.24
CDK9-201ENST00000373264 XCL1P47992 114 aa16.54■□□□□ 0.24
CDK9-201ENST00000373264 HERV-K104P63124 156 aa16.54■□□□□ 0.24
CDK9-201ENST00000373264 LINC00959A0A1B0GUT2 108 aa16.54■□□□□ 0.24
CDK9-201ENST00000373264 M0QXV9 152 aa16.53■□□□□ 0.24
CDK9-201ENST00000373264 PFN2P35080 140 aa16.51■□□□□ 0.23
CDK9-201ENST00000373264 SHISA2Q6UWI4 295 aa16.51■□□□□ 0.23
CDK9-201ENST00000373264 A0A087WZ39 114 aa16.5■□□□□ 0.23
CDK9-201ENST00000373264 LINC00158P58513 81 aa16.5■□□□□ 0.23
CDK9-201ENST00000373264 C9orf66Q5T8R8 295 aa16.5■□□□□ 0.23
CDK9-201ENST00000373264 PRO0255Q9UI72 69 aa16.5■□□□□ 0.23
CDK9-201ENST00000373264 LINC00337Q8N6G1 96 aa16.49■□□□□ 0.23
CDK9-201ENST00000373264 CELA1Q9UNI1 258 aa16.49■□□□□ 0.23
CDK9-201ENST00000373264 IGKV2-28A0A075B6P5 120 aa16.48■□□□□ 0.23
CDK9-201ENST00000373264 IGKV2D-28P01615 120 aa16.48■□□□□ 0.23
CDK9-201ENST00000373264 UBE2WQ96B02 151 aa16.48■□□□□ 0.23
CDK9-201ENST00000373264 IGHV4-28A0A0C4DH34 117 aa16.48■□□□□ 0.23
CDK9-201ENST00000373264 PAX4O43316 350 aa16.48■□□□□ 0.23
CDK9-201ENST00000373264 FAM218AQ96MZ4 157 aa16.48■□□□□ 0.23
CDK9-201ENST00000373264 COX7A2LO14548 114 aa16.46■□□□□ 0.23
CDK9-201ENST00000373264 SCGB1A1P11684 91 aa16.46■□□□□ 0.23
CDK9-201ENST00000373264 LINC01600Q96MT4 127 aa16.46■□□□□ 0.23
CDK9-201ENST00000373264 SND1-IT1Q9HBX3 110 aa16.45■□□□□ 0.22
CDK9-201ENST00000373264 CCL18P55774 89 aa16.44■□□□□ 0.22
CDK9-201ENST00000373264 SMIM9A6NGZ8 99 aa16.44■□□□□ 0.22
CDK9-201ENST00000373264 IGLV10-54A0A075B6I4 117 aa16.43■□□□□ 0.22
CDK9-201ENST00000373264 H3BT86 120 aa16.43■□□□□ 0.22
CDK9-201ENST00000373264 LINC00269Q8N2A0 174 aa16.43■□□□□ 0.22
CDK9-201ENST00000373264 COPS9Q8WXC6 57 aa16.42■□□□□ 0.22
CDK9-201ENST00000373264 TRAV8-4A0A0B4J246 113 aa16.41■□□□□ 0.22
CDK9-201ENST00000373264 TRAV26-1A0A087WT03 109 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms