RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 VSIG2Q96IQ7 327 aa9.93□□□□□ -0.82
LDB3-204ENST00000372066 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
LDB3-204ENST00000372066 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 UBE2L6O14933 153 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 LINC00694P0DN24 101 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 APOC4P55056 127 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 RPL24P83731 157 aaKnown RBP9.92□□□□□ -0.82
LDB3-204ENST00000372066 FHL2Q14192 279 aa9.92□□□□□ -0.82
LDB3-204ENST00000372066 RNASE13Q5GAN3 156 aaKnown RBP9.92□□□□□ -0.82
LDB3-204ENST00000372066 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
LDB3-204ENST00000372066 A8MZ25 164 aa9.91□□□□□ -0.82
LDB3-204ENST00000372066 TIMM17BO60830 172 aa9.91□□□□□ -0.82
LDB3-204ENST00000372066 IGHV3-64A0A075B6Q5 118 aa9.9□□□□□ -0.82
LDB3-204ENST00000372066 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
LDB3-204ENST00000372066 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
LDB3-204ENST00000372066 SPATA25Q9BR10 227 aa9.9□□□□□ -0.82
LDB3-204ENST00000372066 VPS25Q9BRG1 176 aa9.9□□□□□ -0.82
LDB3-204ENST00000372066 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
LDB3-204ENST00000372066 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.89□□□□□ -0.83
LDB3-204ENST00000372066 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
LDB3-204ENST00000372066 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
LDB3-204ENST00000372066 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
LDB3-204ENST00000372066 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
LDB3-204ENST00000372066 X6R8D5 127 aa9.89□□□□□ -0.83
LDB3-204ENST00000372066 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
LDB3-204ENST00000372066 DNAH1Q9P2D7 4330 aa9.89□□□□□ -0.83
LDB3-204ENST00000372066 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 A0A0B4J2C4 111 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 NDUFA1O15239 70 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 SPINK8P0C7L1 97 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
LDB3-204ENST00000372066 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
LDB3-204ENST00000372066 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
LDB3-204ENST00000372066 TRBV6-8A0A0A6YYG3 113 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 F8W1H4 67 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 APOMO95445 188 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 CFC1P0CG37 223 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 RNF183Q96D59 192 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 PRO1854Q9UHT4 67 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 STARD9Q9P2P6 4700 aa9.86□□□□□ -0.83
LDB3-204ENST00000372066 LOC100131303A0A0U1RQF7 123 aa9.85□□□□□ -0.83
LDB3-204ENST00000372066 TSPAN13O95857 204 aa9.85□□□□□ -0.83
LDB3-204ENST00000372066 IFITM1P13164 125 aa9.85□□□□□ -0.83
LDB3-204ENST00000372066 LITAFQ99732 161 aa9.85□□□□□ -0.83
LDB3-204ENST00000372066 A4D1N5 150 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 MIAQ16674 131 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 PRO0255Q9UI72 69 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 DEFB130BP0DP73 79 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 DEFB130AP0DP74 79 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 CIRBPQ14011 172 aaKnown RBP9.84□□□□□ -0.83
LDB3-204ENST00000372066 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 RETNQ9HD89 108 aa9.84□□□□□ -0.83
LDB3-204ENST00000372066 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
LDB3-204ENST00000372066 MIFP14174 115 aa9.83□□□□□ -0.84
LDB3-204ENST00000372066 COX6A2Q02221 97 aa9.83□□□□□ -0.84
LDB3-204ENST00000372066 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
LDB3-204ENST00000372066 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
LDB3-204ENST00000372066 TRAV13-1A0A0B4J241 112 aa9.82□□□□□ -0.84
LDB3-204ENST00000372066 HERV-K104P63124 156 aa9.82□□□□□ -0.84
LDB3-204ENST00000372066 LYSTQ99698 3801 aa9.82□□□□□ -0.84
LDB3-204ENST00000372066 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
LDB3-204ENST00000372066 J3QR89 54 aa9.81□□□□□ -0.84
LDB3-204ENST00000372066 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
LDB3-204ENST00000372066 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
LDB3-204ENST00000372066 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
LDB3-204ENST00000372066 F5H768 121 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 GYPEP15421 78 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 C21orf62-AS1Q17RA5 79 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 IGHV3-33P01772 117 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 GAGE6Q13070 117 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
LDB3-204ENST00000372066 LOC107984156A0A0G2JMH3 177 aa9.79□□□□□ -0.84
LDB3-204ENST00000372066 A0A1B0GUV1 79 aa9.79□□□□□ -0.84
LDB3-204ENST00000372066 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
LDB3-204ENST00000372066 H3BMG7 143 aa9.79□□□□□ -0.84
LDB3-204ENST00000372066 ARL17AQ8IVW1 177 aa9.79□□□□□ -0.84
LDB3-204ENST00000372066 TRAV26-1A0A087WT03 109 aa9.78□□□□□ -0.84
LDB3-204ENST00000372066 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
LDB3-204ENST00000372066 PAX4O43316 350 aa9.78□□□□□ -0.84
LDB3-204ENST00000372066 SCGB1A1P11684 91 aa9.78□□□□□ -0.84
LDB3-204ENST00000372066 Q9H8V8 135 aa9.78□□□□□ -0.84
LDB3-204ENST00000372066 HYDINQ4G0P3 5121 aa9.78□□□□□ -0.84
LDB3-204ENST00000372066 PRSS2P07478 247 aa9.77□□□□□ -0.85
LDB3-204ENST00000372066 DAD1P61803 113 aa9.77□□□□□ -0.85
LDB3-204ENST00000372066 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
LDB3-204ENST00000372066 SFTA2Q6UW10 78 aa9.77□□□□□ -0.85
LDB3-204ENST00000372066 Q8NAQ8 132 aa9.77□□□□□ -0.85
LDB3-204ENST00000372066 ZNF625Q96I27 306 aaPredicted RBP9.77□□□□□ -0.85
LDB3-204ENST00000372066 ATP5G1P05496 136 aa9.76□□□□□ -0.85
LDB3-204ENST00000372066 PRO0461Q9UI25 63 aa9.76□□□□□ -0.85
LDB3-204ENST00000372066 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
LDB3-204ENST00000372066 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
LDB3-204ENST00000372066 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms