RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
PDE6C-201ENST00000371447 C16orf95Q9H693 158 aa8.36□□□□□ -1.07
PDE6C-201ENST00000371447 Q9H8V8 135 aa8.36□□□□□ -1.07
PDE6C-201ENST00000371447 MEIG1Q5JSS6 88 aa8.36□□□□□ -1.07
PDE6C-201ENST00000371447 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
PDE6C-201ENST00000371447 UBE2D1P51668 147 aa8.35□□□□□ -1.07
PDE6C-201ENST00000371447 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
PDE6C-201ENST00000371447 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
PDE6C-201ENST00000371447 C16orf74Q96GX8 76 aa8.35□□□□□ -1.07
PDE6C-201ENST00000371447 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
PDE6C-201ENST00000371447 PLAC8L1A1L4L8 177 aa8.34□□□□□ -1.07
PDE6C-201ENST00000371447 TCL1BO95988 128 aa8.34□□□□□ -1.07
PDE6C-201ENST00000371447 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
PDE6C-201ENST00000371447 COL6A5A8TX70 2615 aa8.34□□□□□ -1.07
PDE6C-201ENST00000371447 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
PDE6C-201ENST00000371447 TMEM243Q9BU79 118 aa8.34□□□□□ -1.07
PDE6C-201ENST00000371447 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 PRIMA1Q86XR5 153 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 IGLV4-60A0A075B6I1 120 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 UBE2D3P61077 147 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 UBE2D2P62837 147 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 ZFAND6Q6FIF0 208 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 PKD1L1Q8TDX9 2849 aa8.33□□□□□ -1.08
PDE6C-201ENST00000371447 GYPEP15421 78 aa8.32□□□□□ -1.08
PDE6C-201ENST00000371447 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
PDE6C-201ENST00000371447 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
PDE6C-201ENST00000371447 SMIM9A6NGZ8 99 aa8.32□□□□□ -1.08
PDE6C-201ENST00000371447 F5H768 121 aa8.32□□□□□ -1.08
PDE6C-201ENST00000371447 CSNK1G2-AS1Q8NCQ2 148 aa8.32□□□□□ -1.08
PDE6C-201ENST00000371447 C9JAW5 83 aa8.31□□□□□ -1.08
PDE6C-201ENST00000371447 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
PDE6C-201ENST00000371447 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
PDE6C-201ENST00000371447 SPATA25Q9BR10 227 aa8.31□□□□□ -1.08
PDE6C-201ENST00000371447 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
PDE6C-201ENST00000371447 NBEAL1Q6ZS30 2694 aa8.31□□□□□ -1.08
PDE6C-201ENST00000371447 FAM222AQ5U5X8 452 aa8.31□□□□□ -1.08
PDE6C-201ENST00000371447 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
PDE6C-201ENST00000371447 F8W1H4 67 aa8.3□□□□□ -1.08
PDE6C-201ENST00000371447 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
PDE6C-201ENST00000371447 XCL1P47992 114 aa8.3□□□□□ -1.08
PDE6C-201ENST00000371447 FHL2Q14192 279 aa8.3□□□□□ -1.08
PDE6C-201ENST00000371447 Q8N3U1 123 aa8.3□□□□□ -1.08
PDE6C-201ENST00000371447 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
PDE6C-201ENST00000371447 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
PDE6C-201ENST00000371447 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
PDE6C-201ENST00000371447 PFN2P35080 140 aa8.29□□□□□ -1.08
PDE6C-201ENST00000371447 CMC4P56277 68 aaPredicted RBP8.29□□□□□ -1.08
PDE6C-201ENST00000371447 PIK3CD-AS1Q5SR53 167 aa8.29□□□□□ -1.08
PDE6C-201ENST00000371447 IL17DQ8TAD2 202 aa8.29□□□□□ -1.08
PDE6C-201ENST00000371447 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
PDE6C-201ENST00000371447 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
PDE6C-201ENST00000371447 HERVK_113P63121 156 aa8.28□□□□□ -1.08
PDE6C-201ENST00000371447 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
PDE6C-201ENST00000371447 XGP55808 180 aa8.28□□□□□ -1.08
PDE6C-201ENST00000371447 LITAFQ99732 161 aa8.28□□□□□ -1.08
PDE6C-201ENST00000371447 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
PDE6C-201ENST00000371447 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
PDE6C-201ENST00000371447 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
PDE6C-201ENST00000371447 TRIAP1O43715 76 aa8.27□□□□□ -1.09
PDE6C-201ENST00000371447 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
PDE6C-201ENST00000371447 C1orf43Q9BWL3 253 aa8.26□□□□□ -1.09
PDE6C-201ENST00000371447 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
PDE6C-201ENST00000371447 TRBV6-8A0A0A6YYG3 113 aa8.26□□□□□ -1.09
PDE6C-201ENST00000371447 MIAQ16674 131 aa8.26□□□□□ -1.09
PDE6C-201ENST00000371447 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
PDE6C-201ENST00000371447 LINC00158P58513 81 aa8.26□□□□□ -1.09
PDE6C-201ENST00000371447 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
PDE6C-201ENST00000371447 TRBV6-4A0A1B0GX49 114 aa8.25□□□□□ -1.09
PDE6C-201ENST00000371447 PAX4O43316 350 aa8.25□□□□□ -1.09
PDE6C-201ENST00000371447 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 LYRM7Q5U5X0 104 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 X6R8D5 127 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 SLC25A20O43772 301 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 TIRAPP58753 221 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 ANKRD29Q8N6D5 301 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
PDE6C-201ENST00000371447 DAD1P61803 113 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 C9orf66Q5T8R8 295 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 IGHV4-28A0A0C4DH34 117 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 SEC61GP60059 68 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 OVOL2Q9BRP0 275 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 RETNQ9HD89 108 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 MGAM2Q2M2H8 2515 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 SOSTDC1Q6X4U4 206 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
PDE6C-201ENST00000371447 NDUFA1O15239 70 aa8.22□□□□□ -1.09
PDE6C-201ENST00000371447 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
PDE6C-201ENST00000371447 SBSPONQ8IVN8 264 aa8.22□□□□□ -1.09
PDE6C-201ENST00000371447 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
PDE6C-201ENST00000371447 ANGP03950 147 aaKnown RBP8.21□□□□□ -1.09
PDE6C-201ENST00000371447 FOXI1Q12951 378 aa8.21□□□□□ -1.09
PDE6C-201ENST00000371447 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.09
PDE6C-201ENST00000371447 LINC00269Q8N2A0 174 aa8.21□□□□□ -1.09
PDE6C-201ENST00000371447 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms