RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
CD48-201ENST00000368045 CSMD2Q7Z408 3487 aa10.1□□□□□ -0.79
CD48-201ENST00000368045 SNCGO76070 127 aa10.1□□□□□ -0.79
CD48-201ENST00000368045 PF4P02776 101 aa10.1□□□□□ -0.79
CD48-201ENST00000368045 RPL35AP18077 110 aaKnown RBP10.1□□□□□ -0.79
CD48-201ENST00000368045 Q6Q795 121 aa10.09□□□□□ -0.79
CD48-201ENST00000368045 CENPEQ02224 2701 aa10.09□□□□□ -0.79
CD48-201ENST00000368045 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
CD48-201ENST00000368045 COX7B2Q8TF08 81 aa10.09□□□□□ -0.79
CD48-201ENST00000368045 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
CD48-201ENST00000368045 TRACP01848 142 aa10.08□□□□□ -0.8
CD48-201ENST00000368045 FHL2Q14192 279 aa10.08□□□□□ -0.8
CD48-201ENST00000368045 WFDC10AQ9H1F0 79 aa10.08□□□□□ -0.8
CD48-201ENST00000368045 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
CD48-201ENST00000368045 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
CD48-201ENST00000368045 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
CD48-201ENST00000368045 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
CD48-201ENST00000368045 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
CD48-201ENST00000368045 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
CD48-201ENST00000368045 HILS1P60008 231 aa10.06□□□□□ -0.8
CD48-201ENST00000368045 GAGE6Q13070 117 aa10.06□□□□□ -0.8
CD48-201ENST00000368045 KIR2DL5BQ8NHK3 375 aa10.06□□□□□ -0.8
CD48-201ENST00000368045 AKAP9Q99996 3911 aa10.05□□□□□ -0.8
CD48-201ENST00000368045 LINC00612Q8N6U2 182 aa10.04□□□□□ -0.8
CD48-201ENST00000368045 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
CD48-201ENST00000368045 A0A087WZ39 114 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 IGHV3OR16-9A0A0B4J2B5 98 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 ACYP1P07311 99 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 HIST2H2BCQ6DN03 193 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 EPG5Q9HCE0 2579 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 IBA57-AS1B1ANH7 110 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 CRPP02741 224 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 RPL28P46779 137 aaKnown RBP10.03□□□□□ -0.8
CD48-201ENST00000368045 ANAPC13Q9BS18 74 aa10.03□□□□□ -0.8
CD48-201ENST00000368045 APCP25054 2843 aa10.02□□□□□ -0.8
CD48-201ENST00000368045 CHD6Q8TD26 2715 aa10.02□□□□□ -0.81
CD48-201ENST00000368045 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
CD48-201ENST00000368045 CRLF1O75462 422 aa10.01□□□□□ -0.81
CD48-201ENST00000368045 MIR7-3HGQ8N6C7 128 aa10.01□□□□□ -0.81
CD48-201ENST00000368045 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
CD48-201ENST00000368045 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
CD48-201ENST00000368045 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
CD48-201ENST00000368045 SONP18583 2426 aaKnown RBP9.99□□□□□ -0.81
CD48-201ENST00000368045 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
CD48-201ENST00000368045 SMIM9A6NGZ8 99 aa9.99□□□□□ -0.81
CD48-201ENST00000368045 LINC00158P58513 81 aa9.99□□□□□ -0.81
CD48-201ENST00000368045 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
CD48-201ENST00000368045 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 A0A1B0GUV1 79 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 BAALC-AS2P0C853 105 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 NDUFV3P56181 108 aaKnown RBP9.98□□□□□ -0.81
CD48-201ENST00000368045 IGKV2-28A0A075B6P5 120 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 TTC32Q5I0X7 151 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
CD48-201ENST00000368045 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
CD48-201ENST00000368045 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
CD48-201ENST00000368045 LINC00482Q8N8I6 264 aa9.97□□□□□ -0.81
CD48-201ENST00000368045 WNK1Q9H4A3 2382 aa9.96□□□□□ -0.81
CD48-201ENST00000368045 H0YGX0 51 aa9.96□□□□□ -0.81
CD48-201ENST00000368045 INAFM2P0DMQ5 153 aa9.96□□□□□ -0.81
CD48-201ENST00000368045 CCL18P55774 89 aa9.96□□□□□ -0.81
CD48-201ENST00000368045 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.82
CD48-201ENST00000368045 GYPEP15421 78 aa9.96□□□□□ -0.82
CD48-201ENST00000368045 SS18Q15532 418 aa9.96□□□□□ -0.82
CD48-201ENST00000368045 FAM218AQ96MZ4 157 aa9.96□□□□□ -0.82
CD48-201ENST00000368045 PRO0255Q9UI72 69 aa9.96□□□□□ -0.82
CD48-201ENST00000368045 FLNAP21333 2647 aaKnown RBP9.95□□□□□ -0.82
CD48-201ENST00000368045 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
CD48-201ENST00000368045 NHLRC4P0CG21 123 aaPredicted RBP9.94□□□□□ -0.82
CD48-201ENST00000368045 Q8IZM0 81 aa9.94□□□□□ -0.82
CD48-201ENST00000368045 X6R8D5 127 aa9.94□□□□□ -0.82
CD48-201ENST00000368045 LYRM9A8MSI8 78 aa9.93□□□□□ -0.82
CD48-201ENST00000368045 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
CD48-201ENST00000368045 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
CD48-201ENST00000368045 IMUPQ9GZP8 106 aa9.93□□□□□ -0.82
CD48-201ENST00000368045 MALP21145 153 aa9.93□□□□□ -0.82
CD48-201ENST00000368045 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
CD48-201ENST00000368045 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
CD48-201ENST00000368045 CCDC168Q8NDH2 2452 aa9.91□□□□□ -0.82
CD48-201ENST00000368045 DNAL4O96015 105 aa9.91□□□□□ -0.82
CD48-201ENST00000368045 SDIM1Q6ZPB5 146 aa9.91□□□□□ -0.82
CD48-201ENST00000368045 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
CD48-201ENST00000368045 ZNF469Q96JG9 3925 aaPredicted RBP9.91□□□□□ -0.82
CD48-201ENST00000368045 SETXQ7Z333 2677 aaKnown RBP9.91□□□□□ -0.82
CD48-201ENST00000368045 LY6G6DO95868 133 aa9.91□□□□□ -0.82
CD48-201ENST00000368045 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 ANK3Q12955 4377 aaKnown RBP9.9□□□□□ -0.82
CD48-201ENST00000368045 C2CD3Q4AC94 2353 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 J3QKU1 62 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 PAX4O43316 350 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 PFN2P35080 140 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 XCL1P47992 114 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 C9orf66Q5T8R8 295 aa9.9□□□□□ -0.82
CD48-201ENST00000368045 JMJD1CQ15652 2540 aa9.89□□□□□ -0.83
CD48-201ENST00000368045 CXCL5P42830 114 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms