RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 XGP55808 180 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 TIMM17BO60830 172 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 HIGD2BQ4VC39 106 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 LST1O00453 97 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 UBE2D1P51668 147 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
RD3-201ENST00000367002 MUC4Q99102 2169 aa8.4□□□□□ -1.07
RD3-201ENST00000367002 H7C423 109 aa8.4□□□□□ -1.07
RD3-201ENST00000367002 ANKRD17O75179 2603 aaKnown RBP8.39□□□□□ -1.07
RD3-201ENST00000367002 IGLV2-18A0A075B6J9 118 aa8.39□□□□□ -1.07
RD3-201ENST00000367002 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
RD3-201ENST00000367002 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
RD3-201ENST00000367002 SMIM9A6NGZ8 99 aa8.39□□□□□ -1.07
RD3-201ENST00000367002 H3BQ85 93 aa8.39□□□□□ -1.07
RD3-201ENST00000367002 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
RD3-201ENST00000367002 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
RD3-201ENST00000367002 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
RD3-201ENST00000367002 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
RD3-201ENST00000367002 PDE6GP18545 87 aa8.38□□□□□ -1.07
RD3-201ENST00000367002 IGLV4-69A0A075B6H9 119 aa8.37□□□□□ -1.07
RD3-201ENST00000367002 LYRM9A8MSI8 78 aa8.37□□□□□ -1.07
RD3-201ENST00000367002 COX7BP24311 80 aa8.37□□□□□ -1.07
RD3-201ENST00000367002 C6orf99Q4VX62 202 aa8.37□□□□□ -1.07
RD3-201ENST00000367002 CRIP2P52943 208 aaPredicted RBP8.37□□□□□ -1.07
RD3-201ENST00000367002 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
RD3-201ENST00000367002 BBC3Q96PG8 261 aaPredicted RBP8.37□□□□□ -1.07
RD3-201ENST00000367002 J3KT08 172 aa8.37□□□□□ -1.07
RD3-201ENST00000367002 TMEM258P61165 79 aa8.36□□□□□ -1.07
RD3-201ENST00000367002 NDUFA7O95182 113 aa8.36□□□□□ -1.07
RD3-201ENST00000367002 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
RD3-201ENST00000367002 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
RD3-201ENST00000367002 UQCRQO14949 82 aa8.35□□□□□ -1.07
RD3-201ENST00000367002 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
RD3-201ENST00000367002 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
RD3-201ENST00000367002 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
RD3-201ENST00000367002 ZNF292O60281 2723 aa8.34□□□□□ -1.07
RD3-201ENST00000367002 RAI1Q7Z5J4 1906 aaPredicted RBP8.34□□□□□ -1.07
RD3-201ENST00000367002 LINC00526Q96FQ7 95 aa8.34□□□□□ -1.07
RD3-201ENST00000367002 F8P00451 2351 aa8.34□□□□□ -1.07
RD3-201ENST00000367002 USP24Q9UPU5 2620 aa8.34□□□□□ -1.07
RD3-201ENST00000367002 UBE2D3P61077 147 aa8.33□□□□□ -1.08
RD3-201ENST00000367002 UBE2D2P62837 147 aa8.33□□□□□ -1.08
RD3-201ENST00000367002 UPK3BQ9BT76 320 aa8.33□□□□□ -1.08
RD3-201ENST00000367002 LINC00959A0A1B0GUT2 108 aa8.33□□□□□ -1.08
RD3-201ENST00000367002 SMIM11BQ8TCY0 68 aa8.32□□□□□ -1.08
RD3-201ENST00000367002 PTPRBP23467 1997 aa8.32□□□□□ -1.08
RD3-201ENST00000367002 ZNF843Q8N446 348 aa8.32□□□□□ -1.08
RD3-201ENST00000367002 PRB2P02812 416 aaPredicted RBP8.32□□□□□ -1.08
RD3-201ENST00000367002 CD164L2Q6UWJ8 174 aa8.32□□□□□ -1.08
RD3-201ENST00000367002 BOD1L1Q8NFC6 3051 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 BRI3O95415 125 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 ENHOQ6UWT2 76 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 INAFM1C9JVW0 142 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 BPY2O14599 106 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 ADAMTSL4-AS1Q5T5F5 129 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 C11orf45Q8TAV5 145 aa8.31□□□□□ -1.08
RD3-201ENST00000367002 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 NDUFS5O43920 106 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 KRTAP10-9P60411 292 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 MIFP14174 115 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 Q6ZQY7 126 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 CHCHD7Q9BUK0 85 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
RD3-201ENST00000367002 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
RD3-201ENST00000367002 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
RD3-201ENST00000367002 MP68P56378 58 aa8.29□□□□□ -1.08
RD3-201ENST00000367002 AMELXQ99217 191 aa8.29□□□□□ -1.08
RD3-201ENST00000367002 FAM110AQ9BQ89 295 aa8.29□□□□□ -1.08
RD3-201ENST00000367002 C1orf158Q8N1D5 194 aa8.28□□□□□ -1.08
RD3-201ENST00000367002 C3orf22Q8N5N4 141 aa8.28□□□□□ -1.08
RD3-201ENST00000367002 KIF25-AS1Q9Y6Z4 181 aa8.28□□□□□ -1.08
RD3-201ENST00000367002 DEFB131BA0A096LNP1 70 aa8.28□□□□□ -1.08
RD3-201ENST00000367002 COX6A2Q02221 97 aa8.28□□□□□ -1.08
RD3-201ENST00000367002 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
RD3-201ENST00000367002 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
RD3-201ENST00000367002 CCDC179H3BU77 68 aa8.27□□□□□ -1.09
RD3-201ENST00000367002 NDUFB1O75438 58 aa8.27□□□□□ -1.09
RD3-201ENST00000367002 UBE2AP49459 152 aa8.27□□□□□ -1.09
RD3-201ENST00000367002 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
RD3-201ENST00000367002 ATRQ13535 2644 aa8.26□□□□□ -1.09
RD3-201ENST00000367002 Q6ZSN1 163 aa8.26□□□□□ -1.09
RD3-201ENST00000367002 REV3LO60673 3130 aa8.26□□□□□ -1.09
RD3-201ENST00000367002 MYO15AQ9UKN7 3530 aa8.26□□□□□ -1.09
RD3-201ENST00000367002 HILS1P60008 231 aa8.25□□□□□ -1.09
RD3-201ENST00000367002 IGLV4-60A0A075B6I1 120 aa8.25□□□□□ -1.09
RD3-201ENST00000367002 CCKP06307 115 aa8.25□□□□□ -1.09
RD3-201ENST00000367002 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
RD3-201ENST00000367002 WFDC9Q8NEX5 89 aa8.25□□□□□ -1.09
RD3-201ENST00000367002 FAM240AA0A1B0GVK7 77 aa8.24□□□□□ -1.09
RD3-201ENST00000367002 Q8IZM0 81 aa8.24□□□□□ -1.09
RD3-201ENST00000367002 SERP2Q8N6R1 65 aa8.24□□□□□ -1.09
RD3-201ENST00000367002 NBEAQ8NFP9 2946 aa8.24□□□□□ -1.09
RD3-201ENST00000367002 CFAP46Q8IYW2 2715 aa8.24□□□□□ -1.09
RD3-201ENST00000367002 LELP1Q5T871 98 aa8.23□□□□□ -1.09
RD3-201ENST00000367002 LINC00315P59091 139 aa8.23□□□□□ -1.09
RD3-201ENST00000367002 BEAN1Q3B7T3 259 aa8.23□□□□□ -1.09
RD3-201ENST00000367002 CSDC2Q9Y534 153 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms